RNA–Protein interactions for RNA: ENST00000526564.1

PPP1R16A-204, Transcript of protein phosphatase 1 regulatory subunit 16A, humanhuman

TSL 5

Gene PPP1R16A, Length 675 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R16A-204ENST00000526564 NISCHQ9Y2I1 1504 aa59.64■■■■■ 7.14
PPP1R16A-204ENST00000526564 CCDC180Q9P1Z9 1646 aa53.06■■■■■ 6.08
PPP1R16A-204ENST00000526564 ABCC9O60706 1549 aa52.24■■■■■ 5.95
PPP1R16A-204ENST00000526564 RB1CC1Q8TDY2 1594 aa50.09■■■■■ 5.61
PPP1R16A-204ENST00000526564 DCAF8L2P0C7V8 631 aa49.98■■■■■ 5.59
PPP1R16A-204ENST00000526564 NACADO15069 1562 aa49.97■■■■■ 5.59
PPP1R16A-204ENST00000526564 ZCCHC6Q5VYS8 1495 aaKnown RBP49.64■■■■■ 5.54
PPP1R16A-204ENST00000526564 MYO15BQ96JP2 1530 aa49.59■■■■■ 5.53
PPP1R16A-204ENST00000526564 DCAF1Q9Y4B6 1507 aa49.3■■■■■ 5.48
PPP1R16A-204ENST00000526564 UNC13AQ9UPW8 1703 aa48.92■■■■■ 5.42
PPP1R16A-204ENST00000526564 PABPN1Q86U42 306 aaKnown RBP eCLIP48.8■■■■■ 5.4
PPP1R16A-204ENST00000526564 BICRAQ9NZM4 1560 aa48.6■■■■■ 5.37
PPP1R16A-204ENST00000526564 SCRIBQ14160 1630 aa48.47■■■■■ 5.35
PPP1R16A-204ENST00000526564 DNAJC5BQ9UF47 199 aa48.18■■■■■ 5.3
PPP1R16A-204ENST00000526564 SHROOM4Q9ULL8 1493 aa48.03■■■■■ 5.28
PPP1R16A-204ENST00000526564 EIF4G1Q04637 1599 aaKnown RBP47.34■■■■■ 5.17
PPP1R16A-204ENST00000526564 CC2D2AQ9P2K1 1620 aa47.2■■■■■ 5.15
PPP1R16A-204ENST00000526564 CECR2Q9BXF3 1484 aa46.95■■■■■ 5.11
PPP1R16A-204ENST00000526564 SMARCA4P51532 1647 aa46.32■■■■■ 5
PPP1R16A-204ENST00000526564 BAZ1AQ9NRL2 1556 aaPredicted RBP46.22■■■■■ 4.99
PPP1R16A-204ENST00000526564 ATAD2BQ9ULI0 1458 aa46.15■■■■■ 4.98
PPP1R16A-204ENST00000526564 NCAPD3P42695 1498 aa46.14■■■■■ 4.98
PPP1R16A-204ENST00000526564 SMARCA2P51531 1590 aa46.04■■■■■ 4.96
PPP1R16A-204ENST00000526564 MROH2BQ7Z745 1585 aa45.98■■■■■ 4.95
PPP1R16A-204ENST00000526564 HMGXB3Q12766 1538 aa45.87■■■■■ 4.93
PPP1R16A-204ENST00000526564 PEG3Q9GZU2 1588 aa45.85■■■■■ 4.93
PPP1R16A-204ENST00000526564 BAZ1BQ9UIG0 1483 aaKnown RBP45.75■■■■■ 4.91
PPP1R16A-204ENST00000526564 WIZO95785 1651 aa45.46■■■■■ 4.87
PPP1R16A-204ENST00000526564 RSF1Q96T23 1441 aaPredicted RBP45.38■■■■■ 4.86
PPP1R16A-204ENST00000526564 NESP48681 1621 aa45.14■■■■■ 4.82
PPP1R16A-204ENST00000526564 ERCC6Q03468 1493 aa45.02■■■■■ 4.8
PPP1R16A-204ENST00000526564 TOP2AP11388 1531 aaKnown RBP44.96■■■■■ 4.79
PPP1R16A-204ENST00000526564 LAMC3Q9Y6N6 1575 aa44.93■■■■■ 4.78
PPP1R16A-204ENST00000526564 CADPSQ9ULU8 1353 aa44.8■■■■■ 4.76
PPP1R16A-204ENST00000526564 PDS5BQ9NTI5 1447 aa44.67■■■■■ 4.74
PPP1R16A-204ENST00000526564 CUX2O14529 1486 aa44.6■■■■■ 4.73
PPP1R16A-204ENST00000526564 KIF21AQ7Z4S6 1674 aa44.54■■■■■ 4.72
PPP1R16A-204ENST00000526564 CFTRP13569 1480 aa44.47■■■■■ 4.71
PPP1R16A-204ENST00000526564 THOC2Q8NI27 1593 aaKnown RBP44.47■■■■■ 4.71
PPP1R16A-204ENST00000526564 CCDC88BA6NC98 1476 aa44.46■■■■■ 4.71
PPP1R16A-204ENST00000526564 FANCD2Q9BXW9 1451 aa44.29■■■■■ 4.68
PPP1R16A-204ENST00000526564 CEP164Q9UPV0 1460 aa44.24■■■■■ 4.67
PPP1R16A-204ENST00000526564 MRC2Q9UBG0 1479 aa44.22■■■■■ 4.67
PPP1R16A-204ENST00000526564 SUPT5HO00267 1087 aaKnown RBP44.09■■■■■ 4.65
PPP1R16A-204ENST00000526564 WDR62O43379 1518 aa44.09■■■■■ 4.65
PPP1R16A-204ENST00000526564 PRDM2Q13029 1718 aa44.03■■■■■ 4.64
PPP1R16A-204ENST00000526564 URB2Q14146 1524 aaKnown RBP43.86■■■■■ 4.61
PPP1R16A-204ENST00000526564 TOPBP1Q92547 1522 aa43.55■■■■■ 4.56
PPP1R16A-204ENST00000526564 DNAJC5Q9H3Z4 198 aa43.53■■■■■ 4.56
PPP1R16A-204ENST00000526564 ABCC8Q09428 1581 aa43.49■■■■■ 4.55
PPP1R16A-204ENST00000526564 DNMBPQ6XZF7 1577 aa43.46■■■■■ 4.55
PPP1R16A-204ENST00000526564 IFT140Q96RY7 1462 aa43.32■■■■■ 4.53
PPP1R16A-204ENST00000526564 ZNF608Q9ULD9 1512 aaPredicted RBP43.18■■■■■ 4.5
PPP1R16A-204ENST00000526564 POLA1P09884 1462 aaPredicted RBP43.17■■■■■ 4.5
PPP1R16A-204ENST00000526564 CUX1P39880 1505 aa43.15■■■■■ 4.5
PPP1R16A-204ENST00000526564 TARBP1Q13395 1621 aaKnown RBP43.07■■■■■ 4.48
PPP1R16A-204ENST00000526564 FGD5Q6ZNL6 1462 aa43.04■■■■■ 4.48
PPP1R16A-204ENST00000526564 RAD54L2Q9Y4B4 1467 aa43.01■■■■■ 4.48
PPP1R16A-204ENST00000526564 SOGA1O94964 1423 aa42.99■■■■■ 4.47
PPP1R16A-204ENST00000526564 EIF4G3O43432 1585 aaKnown RBP42.96■■■■■ 4.47
PPP1R16A-204ENST00000526564 AQRO60306 1485 aaKnown RBP eCLIP42.91■■■■■ 4.46
PPP1R16A-204ENST00000526564 TDRD9Q8NDG6 1382 aaKnown RBP42.8■■■■■ 4.44
PPP1R16A-204ENST00000526564 WRNQ14191 1432 aaPredicted RBP eCLIP42.79■■■■■ 4.44
PPP1R16A-204ENST00000526564 OSCARQ8IYS5 282 aa42.73■■■■■ 4.43
PPP1R16A-204ENST00000526564 SYNJ1O43426 1573 aa42.69■■■■■ 4.43
PPP1R16A-204ENST00000526564 TOP2BQ02880 1626 aa42.68■■■■■ 4.42
PPP1R16A-204ENST00000526564 WDR97A6NE52 1622 aa42.68■■■■■ 4.42
PPP1R16A-204ENST00000526564 BIVM-ERCC5R4GMW8 1640 aa42.66■■■■■ 4.42
PPP1R16A-204ENST00000526564 ABCA10Q8WWZ4 1543 aa42.6■■■■■ 4.41
PPP1R16A-204ENST00000526564 GRIN2BQ13224 1484 aa42.5■■■■■ 4.39
PPP1R16A-204ENST00000526564 SNAPC4Q5SXM2 1469 aa42.5■■■■■ 4.39
PPP1R16A-204ENST00000526564 GAPVD1Q14C86 1478 aa42.49■■■■■ 4.39
PPP1R16A-204ENST00000526564 FBLN2P98095 1184 aa42.45■■■■■ 4.39
PPP1R16A-204ENST00000526564 CHD1O14646 1710 aa42.43■■■■■ 4.38
PPP1R16A-204ENST00000526564 ABCA5Q8WWZ7 1642 aa42.43■■■■■ 4.38
PPP1R16A-204ENST00000526564 MAGI1Q96QZ7 1491 aaPredicted RBP42.41■■■■■ 4.38
PPP1R16A-204ENST00000526564 PBRM1Q86U86 1689 aa42.36■■■■■ 4.37
PPP1R16A-204ENST00000526564 CHMP7Q8WUX9 453 aaPredicted RBP42.27■■■■■ 4.36
PPP1R16A-204ENST00000526564 SYNJ2O15056 1496 aa42.25■■■■■ 4.35
PPP1R16A-204ENST00000526564 RIMBP3CA6NJZ7 1639 aa42.06■■■■■ 4.32
PPP1R16A-204ENST00000526564 RIMBP3BA6NNM3 1639 aa42.06■■■■■ 4.32
PPP1R16A-204ENST00000526564 RIMBP3Q9UFD9 1639 aa42.06■■■■■ 4.32
PPP1R16A-204ENST00000526564 ADAMTS12P58397 1594 aa42.06■■■■■ 4.32
PPP1R16A-204ENST00000526564 ERICH3Q5RHP9 1530 aa42.06■■■■■ 4.32
PPP1R16A-204ENST00000526564 ARHGEF11O15085 1522 aa42.05■■■■■ 4.32
PPP1R16A-204ENST00000526564 TRIM41Q8WV44 630 aa42.05■■■■■ 4.32
PPP1R16A-204ENST00000526564 CLASP1Q7Z460 1538 aa42.01■■■■■ 4.32
PPP1R16A-204ENST00000526564 FHAD1B1AJZ9 1412 aa41.98■■■■■ 4.31
PPP1R16A-204ENST00000526564 GRIN2AQ12879 1464 aa41.97■■■■■ 4.31
PPP1R16A-204ENST00000526564 KIF27Q86VH2 1401 aa41.9■■■■■ 4.3
PPP1R16A-204ENST00000526564 NUP160Q12769 1436 aa41.79■■■■■ 4.28
PPP1R16A-204ENST00000526564 IGF1RP08069 1367 aa41.78■■■■■ 4.28
PPP1R16A-204ENST00000526564 CEP170Q5SW79 1584 aa41.77■■■■■ 4.28
PPP1R16A-204ENST00000526564 ARAP1Q96P48 1450 aa41.72■■■■■ 4.27
PPP1R16A-204ENST00000526564 CYB5RLQ6IPT4 315 aa41.7■■■■■ 4.27
PPP1R16A-204ENST00000526564 CUL7Q14999 1698 aa41.61■■■■■ 4.25
PPP1R16A-204ENST00000526564 CARMIL1Q5VZK9 1371 aa41.51■■■■■ 4.24
PPP1R16A-204ENST00000526564 RUSC2Q8N2Y8 1516 aa41.49■■■■■ 4.23
PPP1R16A-204ENST00000526564 SHROOM2Q13796 1616 aa41.47■■■■■ 4.23
PPP1R16A-204ENST00000526564 ERCC6L2Q5T890 1561 aa41.45■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms