RNA–Protein interactions for RNA: ENST00000526497.5

YIF1A-211, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 5

Gene YIF1A, Length 516 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-211ENST00000526497 NISCHQ9Y2I1 1504 aa35.44■■■■□ 3.26
YIF1A-211ENST00000526497 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
YIF1A-211ENST00000526497 ABCC9O60706 1549 aa31.54■■■□□ 2.64
YIF1A-211ENST00000526497 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
YIF1A-211ENST00000526497 NACADO15069 1562 aa30.01■■■□□ 2.39
YIF1A-211ENST00000526497 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
YIF1A-211ENST00000526497 MYO15BQ96JP2 1530 aa29.69■■■□□ 2.34
YIF1A-211ENST00000526497 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
YIF1A-211ENST00000526497 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
YIF1A-211ENST00000526497 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
YIF1A-211ENST00000526497 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
YIF1A-211ENST00000526497 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
YIF1A-211ENST00000526497 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
YIF1A-211ENST00000526497 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
YIF1A-211ENST00000526497 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
YIF1A-211ENST00000526497 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
YIF1A-211ENST00000526497 EIF4G1Q04637 1599 aaKnown RBP28.47■■■□□ 2.15
YIF1A-211ENST00000526497 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
YIF1A-211ENST00000526497 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
YIF1A-211ENST00000526497 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
YIF1A-211ENST00000526497 SMARCA2P51531 1590 aa27.57■■■□□ 2
YIF1A-211ENST00000526497 SMARCA4P51532 1647 aa27.55■■■□□ 2
YIF1A-211ENST00000526497 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
YIF1A-211ENST00000526497 HMGXB3Q12766 1538 aa27.47■■□□□ 1.99
YIF1A-211ENST00000526497 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
YIF1A-211ENST00000526497 PEG3Q9GZU2 1588 aa27.34■■□□□ 1.97
YIF1A-211ENST00000526497 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
YIF1A-211ENST00000526497 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
YIF1A-211ENST00000526497 CUX2O14529 1486 aa27.21■■□□□ 1.95
YIF1A-211ENST00000526497 NESP48681 1621 aa27.09■■□□□ 1.93
YIF1A-211ENST00000526497 DNAJC5Q9H3Z4 198 aa27.07■■□□□ 1.92
YIF1A-211ENST00000526497 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
YIF1A-211ENST00000526497 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
YIF1A-211ENST00000526497 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
YIF1A-211ENST00000526497 WIZO95785 1651 aa26.88■■□□□ 1.89
YIF1A-211ENST00000526497 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
YIF1A-211ENST00000526497 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
YIF1A-211ENST00000526497 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
YIF1A-211ENST00000526497 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
YIF1A-211ENST00000526497 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
YIF1A-211ENST00000526497 CFTRP13569 1480 aa26.59■■□□□ 1.85
YIF1A-211ENST00000526497 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
YIF1A-211ENST00000526497 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
YIF1A-211ENST00000526497 WDR62O43379 1518 aa26.51■■□□□ 1.83
YIF1A-211ENST00000526497 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
YIF1A-211ENST00000526497 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
YIF1A-211ENST00000526497 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
YIF1A-211ENST00000526497 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
YIF1A-211ENST00000526497 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
YIF1A-211ENST00000526497 IFT140Q96RY7 1462 aa26.05■■□□□ 1.76
YIF1A-211ENST00000526497 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
YIF1A-211ENST00000526497 DNMBPQ6XZF7 1577 aa25.94■■□□□ 1.74
YIF1A-211ENST00000526497 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
YIF1A-211ENST00000526497 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
YIF1A-211ENST00000526497 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
YIF1A-211ENST00000526497 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
YIF1A-211ENST00000526497 SOGA1O94964 1423 aa25.74■■□□□ 1.71
YIF1A-211ENST00000526497 AQRO60306 1485 aaKnown RBP eCLIP25.73■■□□□ 1.712e-8■■■■■ 27.5
YIF1A-211ENST00000526497 TARBP1Q13395 1621 aaKnown RBP25.73■■□□□ 1.71
YIF1A-211ENST00000526497 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
YIF1A-211ENST00000526497 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
YIF1A-211ENST00000526497 FBLN2P98095 1184 aa25.63■■□□□ 1.69
YIF1A-211ENST00000526497 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
YIF1A-211ENST00000526497 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
YIF1A-211ENST00000526497 CUX1P39880 1505 aa25.59■■□□□ 1.69
YIF1A-211ENST00000526497 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
YIF1A-211ENST00000526497 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
YIF1A-211ENST00000526497 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
YIF1A-211ENST00000526497 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
YIF1A-211ENST00000526497 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
YIF1A-211ENST00000526497 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
YIF1A-211ENST00000526497 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
YIF1A-211ENST00000526497 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
YIF1A-211ENST00000526497 CHD1O14646 1710 aa25.45■■□□□ 1.66
YIF1A-211ENST00000526497 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
YIF1A-211ENST00000526497 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
YIF1A-211ENST00000526497 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
YIF1A-211ENST00000526497 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
YIF1A-211ENST00000526497 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
YIF1A-211ENST00000526497 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
YIF1A-211ENST00000526497 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
YIF1A-211ENST00000526497 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
YIF1A-211ENST00000526497 CLASP1Q7Z460 1538 aa25.24■■□□□ 1.63
YIF1A-211ENST00000526497 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
YIF1A-211ENST00000526497 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
YIF1A-211ENST00000526497 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
YIF1A-211ENST00000526497 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
YIF1A-211ENST00000526497 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
YIF1A-211ENST00000526497 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
YIF1A-211ENST00000526497 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
YIF1A-211ENST00000526497 ERICH3Q5RHP9 1530 aa25.08■■□□□ 1.61
YIF1A-211ENST00000526497 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
YIF1A-211ENST00000526497 NUP160Q12769 1436 aa25.03■■□□□ 1.6
YIF1A-211ENST00000526497 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
YIF1A-211ENST00000526497 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
YIF1A-211ENST00000526497 JPH4Q96JJ6 628 aa24.88■■□□□ 1.57
YIF1A-211ENST00000526497 IGF1RP08069 1367 aa24.84■■□□□ 1.57
YIF1A-211ENST00000526497 SHROOM2Q13796 1616 aa24.83■■□□□ 1.56
YIF1A-211ENST00000526497 PRG4Q92954 1404 aaPredicted RBP24.8■■□□□ 1.56
YIF1A-211ENST00000526497 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms