RNA–Protein interactions for RNA: ENST00000526442.5

PRDM11-202, Transcript of PR/SET domain 11, humanhuman

TSL 3

Gene PRDM11, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-202ENST00000526442 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
PRDM11-202ENST00000526442 CCDC180Q9P1Z9 1646 aa44.35■■■■■ 4.69
PRDM11-202ENST00000526442 ABCC9O60706 1549 aa43.7■■■■■ 4.59
PRDM11-202ENST00000526442 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.29
PRDM11-202ENST00000526442 NACADO15069 1562 aa41.73■■■■■ 4.27
PRDM11-202ENST00000526442 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
PRDM11-202ENST00000526442 MYO15BQ96JP2 1530 aa41.34■■■■■ 4.21
PRDM11-202ENST00000526442 ZCCHC6Q5VYS8 1495 aaKnown RBP41.28■■■■■ 4.2
PRDM11-202ENST00000526442 UNC13AQ9UPW8 1703 aa41.06■■■■■ 4.16
PRDM11-202ENST00000526442 DCAF1Q9Y4B6 1507 aa41.04■■■■■ 4.16
PRDM11-202ENST00000526442 PABPN1Q86U42 306 aaKnown RBP eCLIP40.76■■■■■ 4.12
PRDM11-202ENST00000526442 BICRAQ9NZM4 1560 aa40.66■■■■■ 4.1
PRDM11-202ENST00000526442 DNAJC5BQ9UF47 199 aa40.44■■■■■ 4.06
PRDM11-202ENST00000526442 SCRIBQ14160 1630 aa40.43■■■■■ 4.06
PRDM11-202ENST00000526442 SHROOM4Q9ULL8 1493 aa40.12■■■■■ 4.01
PRDM11-202ENST00000526442 EIF4G1Q04637 1599 aaKnown RBP39.59■■■■□ 3.93
PRDM11-202ENST00000526442 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
PRDM11-202ENST00000526442 CECR2Q9BXF3 1484 aa39.29■■■■□ 3.88
PRDM11-202ENST00000526442 SMARCA4P51532 1647 aa38.63■■■■□ 3.78
PRDM11-202ENST00000526442 BAZ1AQ9NRL2 1556 aaPredicted RBP38.5■■■■□ 3.75
PRDM11-202ENST00000526442 NCAPD3P42695 1498 aa38.49■■■■□ 3.75
PRDM11-202ENST00000526442 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
PRDM11-202ENST00000526442 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
PRDM11-202ENST00000526442 HMGXB3Q12766 1538 aa38.29■■■■□ 3.72
PRDM11-202ENST00000526442 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
PRDM11-202ENST00000526442 PEG3Q9GZU2 1588 aa38.24■■■■□ 3.71
PRDM11-202ENST00000526442 BAZ1BQ9UIG0 1483 aaKnown RBP38.14■■■■□ 3.7
PRDM11-202ENST00000526442 WIZO95785 1651 aa37.89■■■■□ 3.66
PRDM11-202ENST00000526442 NESP48681 1621 aa37.73■■■■□ 3.63
PRDM11-202ENST00000526442 RSF1Q96T23 1441 aaPredicted RBP37.68■■■■□ 3.62
PRDM11-202ENST00000526442 ERCC6Q03468 1493 aa37.67■■■■□ 3.62
PRDM11-202ENST00000526442 LAMC3Q9Y6N6 1575 aa37.57■■■■□ 3.6
PRDM11-202ENST00000526442 TOP2AP11388 1531 aaKnown RBP37.41■■■■□ 3.58
PRDM11-202ENST00000526442 CUX2O14529 1486 aa37.39■■■■□ 3.58
PRDM11-202ENST00000526442 KIF21AQ7Z4S6 1674 aa37.34■■■■□ 3.57
PRDM11-202ENST00000526442 CADPSQ9ULU8 1353 aa37.34■■■■□ 3.57
PRDM11-202ENST00000526442 PDS5BQ9NTI5 1447 aa37.27■■■■□ 3.56
PRDM11-202ENST00000526442 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
PRDM11-202ENST00000526442 CFTRP13569 1480 aa37.06■■■■□ 3.52
PRDM11-202ENST00000526442 CCDC88BA6NC98 1476 aa36.97■■■■□ 3.51
PRDM11-202ENST00000526442 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
PRDM11-202ENST00000526442 FANCD2Q9BXW9 1451 aa36.94■■■■□ 3.5
PRDM11-202ENST00000526442 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
PRDM11-202ENST00000526442 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
PRDM11-202ENST00000526442 WDR62O43379 1518 aa36.86■■■■□ 3.49
PRDM11-202ENST00000526442 DNAJC5Q9H3Z4 198 aa36.66■■■■□ 3.46
PRDM11-202ENST00000526442 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
PRDM11-202ENST00000526442 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
PRDM11-202ENST00000526442 TOPBP1Q92547 1522 aa36.32■■■■□ 3.4
PRDM11-202ENST00000526442 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
PRDM11-202ENST00000526442 DNMBPQ6XZF7 1577 aa36.26■■■■□ 3.39
PRDM11-202ENST00000526442 IFT140Q96RY7 1462 aa36.16■■■■□ 3.38
PRDM11-202ENST00000526442 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
PRDM11-202ENST00000526442 TARBP1Q13395 1621 aaKnown RBP35.99■■■■□ 3.35
PRDM11-202ENST00000526442 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
PRDM11-202ENST00000526442 EIF4G3O43432 1585 aaKnown RBP35.93■■■■□ 3.34
PRDM11-202ENST00000526442 CUX1P39880 1505 aa35.93■■■■□ 3.34
PRDM11-202ENST00000526442 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
PRDM11-202ENST00000526442 RAD54L2Q9Y4B4 1467 aa35.85■■■■□ 3.33
PRDM11-202ENST00000526442 SOGA1O94964 1423 aa35.82■■■■□ 3.32
PRDM11-202ENST00000526442 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.32
PRDM11-202ENST00000526442 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
PRDM11-202ENST00000526442 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
PRDM11-202ENST00000526442 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
PRDM11-202ENST00000526442 CHD1O14646 1710 aa35.6■■■■□ 3.29
PRDM11-202ENST00000526442 BIVM-ERCC5R4GMW8 1640 aa35.56■■■■□ 3.28
PRDM11-202ENST00000526442 WRNQ14191 1432 aaPredicted RBP eCLIP35.53■■■■□ 3.28
PRDM11-202ENST00000526442 TOP2BQ02880 1626 aa35.53■■■■□ 3.28
PRDM11-202ENST00000526442 SYNJ1O43426 1573 aa35.51■■■■□ 3.28
PRDM11-202ENST00000526442 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
PRDM11-202ENST00000526442 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
PRDM11-202ENST00000526442 PBRM1Q86U86 1689 aa35.44■■■■□ 3.26
PRDM11-202ENST00000526442 GRIN2BQ13224 1484 aa35.43■■■■□ 3.26
PRDM11-202ENST00000526442 FBLN2P98095 1184 aa35.42■■■■□ 3.26
PRDM11-202ENST00000526442 ABCA5Q8WWZ7 1642 aa35.41■■■■□ 3.26
PRDM11-202ENST00000526442 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
PRDM11-202ENST00000526442 MAGI1Q96QZ7 1491 aaPredicted RBP35.38■■■■□ 3.25
PRDM11-202ENST00000526442 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.25
PRDM11-202ENST00000526442 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.25
PRDM11-202ENST00000526442 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.25
PRDM11-202ENST00000526442 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
PRDM11-202ENST00000526442 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
PRDM11-202ENST00000526442 SYNJ2O15056 1496 aa35.26■■■■□ 3.23
PRDM11-202ENST00000526442 ARHGEF11O15085 1522 aa35.23■■■■□ 3.23
PRDM11-202ENST00000526442 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
PRDM11-202ENST00000526442 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
PRDM11-202ENST00000526442 ERICH3Q5RHP9 1530 aa35.04■■■■□ 3.2
PRDM11-202ENST00000526442 GRIN2AQ12879 1464 aa35■■■■□ 3.19
PRDM11-202ENST00000526442 FHAD1B1AJZ9 1412 aa34.97■■■■□ 3.19
PRDM11-202ENST00000526442 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
PRDM11-202ENST00000526442 CYB5RLQ6IPT4 315 aa34.91■■■■□ 3.18
PRDM11-202ENST00000526442 CEP170Q5SW79 1584 aa34.87■■■■□ 3.17
PRDM11-202ENST00000526442 NUP160Q12769 1436 aa34.84■■■■□ 3.17
PRDM11-202ENST00000526442 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
PRDM11-202ENST00000526442 IGF1RP08069 1367 aa34.71■■■■□ 3.15
PRDM11-202ENST00000526442 CUL7Q14999 1698 aa34.69■■■■□ 3.14
PRDM11-202ENST00000526442 SHROOM2Q13796 1616 aa34.68■■■■□ 3.14
PRDM11-202ENST00000526442 ERCC6L2Q5T890 1561 aa34.65■■■■□ 3.14
PRDM11-202ENST00000526442 RUSC2Q8N2Y8 1516 aa34.58■■■■□ 3.13
PRDM11-202ENST00000526442 CARMIL1Q5VZK9 1371 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms