RNA–Protein interactions for RNA: ENST00000526366.5

FOXRED1-205, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-205ENST00000526366 NISCHQ9Y2I1 1504 aa38.07■■■■□ 3.69
FOXRED1-205ENST00000526366 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
FOXRED1-205ENST00000526366 ABCC9O60706 1549 aa33.43■■■□□ 2.94
FOXRED1-205ENST00000526366 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
FOXRED1-205ENST00000526366 NACADO15069 1562 aa31.96■■■□□ 2.71
FOXRED1-205ENST00000526366 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
FOXRED1-205ENST00000526366 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
FOXRED1-205ENST00000526366 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
FOXRED1-205ENST00000526366 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
FOXRED1-205ENST00000526366 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
FOXRED1-205ENST00000526366 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
FOXRED1-205ENST00000526366 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
FOXRED1-205ENST00000526366 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
FOXRED1-205ENST00000526366 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
FOXRED1-205ENST00000526366 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
FOXRED1-205ENST00000526366 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
FOXRED1-205ENST00000526366 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
FOXRED1-205ENST00000526366 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
FOXRED1-205ENST00000526366 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
FOXRED1-205ENST00000526366 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
FOXRED1-205ENST00000526366 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
FOXRED1-205ENST00000526366 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
FOXRED1-205ENST00000526366 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
FOXRED1-205ENST00000526366 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
FOXRED1-205ENST00000526366 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
FOXRED1-205ENST00000526366 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
FOXRED1-205ENST00000526366 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
FOXRED1-205ENST00000526366 WIZO95785 1651 aa29■■■□□ 2.23
FOXRED1-205ENST00000526366 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
FOXRED1-205ENST00000526366 NESP48681 1621 aa28.87■■■□□ 2.21
FOXRED1-205ENST00000526366 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
FOXRED1-205ENST00000526366 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
FOXRED1-205ENST00000526366 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
FOXRED1-205ENST00000526366 CUX2O14529 1486 aa28.62■■■□□ 2.17
FOXRED1-205ENST00000526366 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
FOXRED1-205ENST00000526366 PDS5BQ9NTI5 1447 aa28.54■■■□□ 2.16
FOXRED1-205ENST00000526366 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
FOXRED1-205ENST00000526366 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
FOXRED1-205ENST00000526366 CFTRP13569 1480 aa28.42■■■□□ 2.14
FOXRED1-205ENST00000526366 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
FOXRED1-205ENST00000526366 MRC2Q9UBG0 1479 aa28.3■■■□□ 2.12
FOXRED1-205ENST00000526366 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
FOXRED1-205ENST00000526366 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
FOXRED1-205ENST00000526366 WDR62O43379 1518 aa28.23■■■□□ 2.11
FOXRED1-205ENST00000526366 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
FOXRED1-205ENST00000526366 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
FOXRED1-205ENST00000526366 DNAJC5Q9H3Z4 198 aa27.97■■■□□ 2.07
FOXRED1-205ENST00000526366 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
FOXRED1-205ENST00000526366 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
FOXRED1-205ENST00000526366 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
FOXRED1-205ENST00000526366 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
FOXRED1-205ENST00000526366 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
FOXRED1-205ENST00000526366 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
FOXRED1-205ENST00000526366 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
FOXRED1-205ENST00000526366 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
FOXRED1-205ENST00000526366 CUX1P39880 1505 aa27.55■■■□□ 2
FOXRED1-205ENST00000526366 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
FOXRED1-205ENST00000526366 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
FOXRED1-205ENST00000526366 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
FOXRED1-205ENST00000526366 SOGA1O94964 1423 aa27.41■■□□□ 1.98
FOXRED1-205ENST00000526366 AQRO60306 1485 aaKnown RBP eCLIP27.4■■□□□ 1.987e-7■■■□□ 19.1
FOXRED1-205ENST00000526366 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
FOXRED1-205ENST00000526366 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
FOXRED1-205ENST00000526366 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
FOXRED1-205ENST00000526366 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
FOXRED1-205ENST00000526366 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
FOXRED1-205ENST00000526366 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
FOXRED1-205ENST00000526366 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
FOXRED1-205ENST00000526366 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
FOXRED1-205ENST00000526366 CHD1O14646 1710 aa27.18■■□□□ 1.94
FOXRED1-205ENST00000526366 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
FOXRED1-205ENST00000526366 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
FOXRED1-205ENST00000526366 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
FOXRED1-205ENST00000526366 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
FOXRED1-205ENST00000526366 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
FOXRED1-205ENST00000526366 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
FOXRED1-205ENST00000526366 FBLN2P98095 1184 aa27.04■■□□□ 1.92
FOXRED1-205ENST00000526366 SYNJ2O15056 1496 aa27■■□□□ 1.91
FOXRED1-205ENST00000526366 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
FOXRED1-205ENST00000526366 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
FOXRED1-205ENST00000526366 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
FOXRED1-205ENST00000526366 ARHGEF11O15085 1522 aa26.95■■□□□ 1.91
FOXRED1-205ENST00000526366 CHMP7Q8WUX9 453 aaPredicted RBP26.95■■□□□ 1.9
FOXRED1-205ENST00000526366 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
FOXRED1-205ENST00000526366 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
FOXRED1-205ENST00000526366 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
FOXRED1-205ENST00000526366 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
FOXRED1-205ENST00000526366 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
FOXRED1-205ENST00000526366 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
FOXRED1-205ENST00000526366 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
FOXRED1-205ENST00000526366 NUP160Q12769 1436 aa26.73■■□□□ 1.87
FOXRED1-205ENST00000526366 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
FOXRED1-205ENST00000526366 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
FOXRED1-205ENST00000526366 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
FOXRED1-205ENST00000526366 IGF1RP08069 1367 aa26.61■■□□□ 1.85
FOXRED1-205ENST00000526366 CUL7Q14999 1698 aa26.57■■□□□ 1.84
FOXRED1-205ENST00000526366 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
FOXRED1-205ENST00000526366 ERCC6L2Q5T890 1561 aa26.53■■□□□ 1.84
FOXRED1-205ENST00000526366 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
FOXRED1-205ENST00000526366 CARMIL1Q5VZK9 1371 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 377.1 ms