RNA–Protein interactions for RNA: ENST00000526346.5

NUP214-216, Transcript of nucleoporin 214, humanhuman

TSL 4

Gene NUP214, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-216ENST00000526346 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.58□□□□□ -1.529e-27■□□□□ 9.2
NUP214-216ENST00000526346 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.384e-21■■□□□ 11.8
NUP214-216ENST00000526346 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.681e-15■□□□□ 8.9
NUP214-216ENST00000526346 EFTUD2Q15029 972 aaKnown RBP eCLIP5.8□□□□□ -1.488e-15■■□□□ 11.5
NUP214-216ENST00000526346 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.77□□□□□ -1.171e-13■■■□□ 15
NUP214-216ENST00000526346 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.12□□□□□ -1.435e-13■□□□□ 8.4
NUP214-216ENST00000526346 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -13e-12■□□□□ 11.1
NUP214-216ENST00000526346 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.956e-12■■■□□ 15
NUP214-216ENST00000526346 ZNF622Q969S3 477 aaKnown RBP eCLIP9.82□□□□□ -0.841e-11■□□□□ 10
NUP214-216ENST00000526346 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.977e-11■■□□□ 12.5
NUP214-216ENST00000526346 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.186e-10■■■■■ 33.9
NUP214-216ENST00000526346 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.06□□□□□ -0.962e-9■□□□□ 10.4
NUP214-216ENST00000526346 EIF3HO15372 352 aaKnown RBP eCLIP5.04□□□□□ -1.63e-9■■□□□ 12.9
NUP214-216ENST00000526346 U2AF2P26368 475 aaKnown RBP eCLIP7.67□□□□□ -1.186e-9■■□□□ 12.3
NUP214-216ENST00000526346 TIA1P31483 386 aaKnown RBP eCLIP5.74□□□□□ -1.491e-8■■□□□ 11.8
NUP214-216ENST00000526346 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.212e-8■■□□□ 12.2
NUP214-216ENST00000526346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.292e-8■■■■■ 37.3
NUP214-216ENST00000526346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.97□□□□□ -1.454e-8■□□□□ 10.4
NUP214-216ENST00000526346 SF3B1O75533 1304 aaKnown RBP eCLIP7.54□□□□□ -1.21e-7■■■■■ 31.8
NUP214-216ENST00000526346 RBM22Q9NW64 420 aaKnown RBP eCLIP6.21□□□□□ -1.422e-7■■■■■ 85
NUP214-216ENST00000526346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.78□□□□□ -1.322e-7■■■■□ 23.7
NUP214-216ENST00000526346 SF3B4Q15427 424 aaKnown RBP eCLIP6.16□□□□□ -1.422e-7■■■■□ 24.8
NUP214-216ENST00000526346 MATR3P43243 847 aaKnown RBP eCLIP7.09□□□□□ -1.276e-7■□□□□ 9.9
NUP214-216ENST00000526346 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.4□□□□□ -1.546e-7■■□□□ 13.7
NUP214-216ENST00000526346 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.357e-7■■□□□ 11.5
NUP214-216ENST00000526346 QKIQ96PU8 341 aaKnown RBP eCLIP5.86□□□□□ -1.479e-7■■■■□ 23
NUP214-216ENST00000526346 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■■□□ 16.1
NUP214-216ENST00000526346 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.92□□□□□ -1.461e-6■■■□□ 16.9
NUP214-216ENST00000526346 HNRNPCP07910 306 aaKnown RBP eCLIP4.21□□□□□ -1.741e-6■□□□□ 8.1
NUP214-216ENST00000526346 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.23□□□□□ -1.411e-6■□□□□ 11.1
NUP214-216ENST00000526346 FXR2P51116 673 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■□□□□ 10.3
NUP214-216ENST00000526346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.873e-6■□□□□ 8.1
NUP214-216ENST00000526346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.22□□□□□ -1.414e-6■■■□□ 18.9
Retrieved 33 of 33 RNA–protein pairs in 10.9 ms