RNA–Protein interactions for RNA: ENST00000526319.5

MRPL49-204, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 1,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-204ENST00000526319 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
MRPL49-204ENST00000526319 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
MRPL49-204ENST00000526319 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
MRPL49-204ENST00000526319 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
MRPL49-204ENST00000526319 DCAF8L2P0C7V8 631 aa33■■■□□ 2.87
MRPL49-204ENST00000526319 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
MRPL49-204ENST00000526319 ABCC9O60706 1549 aa32.72■■■□□ 2.83
MRPL49-204ENST00000526319 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
MRPL49-204ENST00000526319 NACADO15069 1562 aa32.39■■■□□ 2.77
MRPL49-204ENST00000526319 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
MRPL49-204ENST00000526319 SCRIBQ14160 1630 aa32.05■■■□□ 2.72
MRPL49-204ENST00000526319 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
MRPL49-204ENST00000526319 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
MRPL49-204ENST00000526319 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
MRPL49-204ENST00000526319 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
MRPL49-204ENST00000526319 BICRAQ9NZM4 1560 aa31.06■■■□□ 2.56
MRPL49-204ENST00000526319 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
MRPL49-204ENST00000526319 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
MRPL49-204ENST00000526319 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
MRPL49-204ENST00000526319 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
MRPL49-204ENST00000526319 WIZO95785 1651 aa30.7■■■□□ 2.51
MRPL49-204ENST00000526319 CHIC1Q5VXU3 224 aa30.45■■■□□ 2.46
MRPL49-204ENST00000526319 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
MRPL49-204ENST00000526319 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
MRPL49-204ENST00000526319 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
MRPL49-204ENST00000526319 ATAD2BQ9ULI0 1458 aa30.17■■■□□ 2.42
MRPL49-204ENST00000526319 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
MRPL49-204ENST00000526319 CCDC88BA6NC98 1476 aa30.08■■■□□ 2.41
MRPL49-204ENST00000526319 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
MRPL49-204ENST00000526319 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
MRPL49-204ENST00000526319 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
MRPL49-204ENST00000526319 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
MRPL49-204ENST00000526319 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
MRPL49-204ENST00000526319 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
MRPL49-204ENST00000526319 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
MRPL49-204ENST00000526319 CFTRP13569 1480 aa29.28■■■□□ 2.28
MRPL49-204ENST00000526319 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
MRPL49-204ENST00000526319 FAM9AQ8IZU1 332 aaPredicted RBP29.24■■■□□ 2.27
MRPL49-204ENST00000526319 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
MRPL49-204ENST00000526319 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
MRPL49-204ENST00000526319 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.25
MRPL49-204ENST00000526319 TOP2BQ02880 1626 aa29.07■■■□□ 2.24
MRPL49-204ENST00000526319 EEA1Q15075 1411 aa29.04■■■□□ 2.24
MRPL49-204ENST00000526319 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
MRPL49-204ENST00000526319 SOGA1O94964 1423 aa29.01■■■□□ 2.24
MRPL49-204ENST00000526319 CUX1P39880 1505 aa28.92■■■□□ 2.22
MRPL49-204ENST00000526319 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
MRPL49-204ENST00000526319 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
MRPL49-204ENST00000526319 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
MRPL49-204ENST00000526319 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
MRPL49-204ENST00000526319 EHMT2Q96KQ7 1210 aa28.81■■■□□ 2.2
MRPL49-204ENST00000526319 NESP48681 1621 aa28.79■■■□□ 2.2
MRPL49-204ENST00000526319 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
MRPL49-204ENST00000526319 KIF21BO75037 1637 aa28.64■■■□□ 2.18
MRPL49-204ENST00000526319 GOLGA3Q08378 1498 aa28.64■■■□□ 2.18
MRPL49-204ENST00000526319 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
MRPL49-204ENST00000526319 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
MRPL49-204ENST00000526319 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
MRPL49-204ENST00000526319 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
MRPL49-204ENST00000526319 KIF27Q86VH2 1401 aa28.58■■■□□ 2.17
MRPL49-204ENST00000526319 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
MRPL49-204ENST00000526319 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
MRPL49-204ENST00000526319 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
MRPL49-204ENST00000526319 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
MRPL49-204ENST00000526319 CEP162Q5TB80 1403 aa28.45■■■□□ 2.15
MRPL49-204ENST00000526319 CUX2O14529 1486 aa28.44■■■□□ 2.14
MRPL49-204ENST00000526319 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
MRPL49-204ENST00000526319 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
MRPL49-204ENST00000526319 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
MRPL49-204ENST00000526319 ERICH3Q5RHP9 1530 aa28.42■■■□□ 2.14
MRPL49-204ENST00000526319 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
MRPL49-204ENST00000526319 ABCA10Q8WWZ4 1543 aa28.34■■■□□ 2.13
MRPL49-204ENST00000526319 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
MRPL49-204ENST00000526319 IGF1RP08069 1367 aa28.27■■■□□ 2.12
MRPL49-204ENST00000526319 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
MRPL49-204ENST00000526319 WDR97A6NE52 1622 aa28.22■■■□□ 2.11
MRPL49-204ENST00000526319 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
MRPL49-204ENST00000526319 CLIP1P30622 1438 aa28.19■■■□□ 2.1
MRPL49-204ENST00000526319 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
MRPL49-204ENST00000526319 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
MRPL49-204ENST00000526319 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
MRPL49-204ENST00000526319 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
MRPL49-204ENST00000526319 CUL7Q14999 1698 aa28.07■■■□□ 2.08
MRPL49-204ENST00000526319 WDR62O43379 1518 aa28.07■■■□□ 2.08
MRPL49-204ENST00000526319 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
MRPL49-204ENST00000526319 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
MRPL49-204ENST00000526319 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.07
MRPL49-204ENST00000526319 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
MRPL49-204ENST00000526319 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
MRPL49-204ENST00000526319 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
MRPL49-204ENST00000526319 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
MRPL49-204ENST00000526319 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
MRPL49-204ENST00000526319 ARAP1Q96P48 1450 aa27.87■■■□□ 2.05
MRPL49-204ENST00000526319 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
MRPL49-204ENST00000526319 ARHGAP35Q9NRY4 1499 aa27.82■■■□□ 2.04
MRPL49-204ENST00000526319 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.04
MRPL49-204ENST00000526319 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
MRPL49-204ENST00000526319 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
MRPL49-204ENST00000526319 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
MRPL49-204ENST00000526319 APLP2Q06481 763 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms