RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, humanhuman

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-208ENST00000526001 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
CSF1-208ENST00000526001 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
CSF1-208ENST00000526001 ABCC9O60706 1549 aa27.5■■□□□ 1.99
CSF1-208ENST00000526001 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
CSF1-208ENST00000526001 NACADO15069 1562 aa26.09■■□□□ 1.77
CSF1-208ENST00000526001 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
CSF1-208ENST00000526001 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
CSF1-208ENST00000526001 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
CSF1-208ENST00000526001 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
CSF1-208ENST00000526001 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
CSF1-208ENST00000526001 UNC13AQ9UPW8 1703 aa25.62■■□□□ 1.69
CSF1-208ENST00000526001 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
CSF1-208ENST00000526001 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
CSF1-208ENST00000526001 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
CSF1-208ENST00000526001 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
CSF1-208ENST00000526001 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
CSF1-208ENST00000526001 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
CSF1-208ENST00000526001 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
CSF1-208ENST00000526001 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
CSF1-208ENST00000526001 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
CSF1-208ENST00000526001 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
CSF1-208ENST00000526001 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
CSF1-208ENST00000526001 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
CSF1-208ENST00000526001 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
CSF1-208ENST00000526001 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
CSF1-208ENST00000526001 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
CSF1-208ENST00000526001 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
CSF1-208ENST00000526001 NESP48681 1621 aa23.7■■□□□ 1.38
CSF1-208ENST00000526001 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
CSF1-208ENST00000526001 WIZO95785 1651 aa23.61■■□□□ 1.37
CSF1-208ENST00000526001 CUX2O14529 1486 aa23.55■■□□□ 1.36
CSF1-208ENST00000526001 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
CSF1-208ENST00000526001 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
CSF1-208ENST00000526001 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CSF1-208ENST00000526001 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
CSF1-208ENST00000526001 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
CSF1-208ENST00000526001 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
CSF1-208ENST00000526001 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
CSF1-208ENST00000526001 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
CSF1-208ENST00000526001 CFTRP13569 1480 aa23.17■■□□□ 1.3
CSF1-208ENST00000526001 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
CSF1-208ENST00000526001 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
CSF1-208ENST00000526001 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
CSF1-208ENST00000526001 WDR62O43379 1518 aa23.1■■□□□ 1.29
CSF1-208ENST00000526001 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
CSF1-208ENST00000526001 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
CSF1-208ENST00000526001 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
CSF1-208ENST00000526001 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
CSF1-208ENST00000526001 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
CSF1-208ENST00000526001 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
CSF1-208ENST00000526001 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
CSF1-208ENST00000526001 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
CSF1-208ENST00000526001 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
CSF1-208ENST00000526001 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
CSF1-208ENST00000526001 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
CSF1-208ENST00000526001 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
CSF1-208ENST00000526001 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
CSF1-208ENST00000526001 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.194e-6■■■■■ 28.3
CSF1-208ENST00000526001 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
CSF1-208ENST00000526001 CUX1P39880 1505 aa22.43■■□□□ 1.18
CSF1-208ENST00000526001 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
CSF1-208ENST00000526001 SOGA1O94964 1423 aa22.41■■□□□ 1.18
CSF1-208ENST00000526001 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
CSF1-208ENST00000526001 TDRD9Q8NDG6 1382 aaKnown RBP22.37■■□□□ 1.17
CSF1-208ENST00000526001 CHD1O14646 1710 aa22.26■■□□□ 1.15
CSF1-208ENST00000526001 FBLN2P98095 1184 aa22.25■■□□□ 1.15
CSF1-208ENST00000526001 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
CSF1-208ENST00000526001 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
CSF1-208ENST00000526001 RIMBP3CA6NJZ7 1639 aa22.22■■□□□ 1.15
CSF1-208ENST00000526001 RIMBP3BA6NNM3 1639 aa22.22■■□□□ 1.15
CSF1-208ENST00000526001 RIMBP3Q9UFD9 1639 aa22.22■■□□□ 1.15
CSF1-208ENST00000526001 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
CSF1-208ENST00000526001 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
CSF1-208ENST00000526001 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
CSF1-208ENST00000526001 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
CSF1-208ENST00000526001 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
CSF1-208ENST00000526001 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
CSF1-208ENST00000526001 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
CSF1-208ENST00000526001 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
CSF1-208ENST00000526001 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
CSF1-208ENST00000526001 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
CSF1-208ENST00000526001 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
CSF1-208ENST00000526001 PBRM1Q86U86 1689 aa22.08■■□□□ 1.13
CSF1-208ENST00000526001 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
CSF1-208ENST00000526001 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
CSF1-208ENST00000526001 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
CSF1-208ENST00000526001 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
CSF1-208ENST00000526001 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
CSF1-208ENST00000526001 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
CSF1-208ENST00000526001 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
CSF1-208ENST00000526001 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
CSF1-208ENST00000526001 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
CSF1-208ENST00000526001 NUP160Q12769 1436 aa21.82■■□□□ 1.08
CSF1-208ENST00000526001 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
CSF1-208ENST00000526001 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
CSF1-208ENST00000526001 KIF27Q86VH2 1401 aa21.69■■□□□ 1.06
CSF1-208ENST00000526001 IGF1RP08069 1367 aa21.68■■□□□ 1.06
CSF1-208ENST00000526001 SHROOM2Q13796 1616 aa21.68■■□□□ 1.06
CSF1-208ENST00000526001 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
CSF1-208ENST00000526001 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms