RNA–Protein interactions for RNA: ENST00000525841.5

CELF1-208, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-208ENST00000525841 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
CELF1-208ENST00000525841 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
CELF1-208ENST00000525841 ABCC9O60706 1549 aa32.18■■■□□ 2.74
CELF1-208ENST00000525841 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
CELF1-208ENST00000525841 NACADO15069 1562 aa30.72■■■□□ 2.51
CELF1-208ENST00000525841 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
CELF1-208ENST00000525841 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
CELF1-208ENST00000525841 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
CELF1-208ENST00000525841 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
CELF1-208ENST00000525841 UNC13AQ9UPW8 1703 aa30.28■■■□□ 2.44
CELF1-208ENST00000525841 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
CELF1-208ENST00000525841 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
CELF1-208ENST00000525841 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
CELF1-208ENST00000525841 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
CELF1-208ENST00000525841 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
CELF1-208ENST00000525841 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
CELF1-208ENST00000525841 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
CELF1-208ENST00000525841 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
CELF1-208ENST00000525841 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
CELF1-208ENST00000525841 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
CELF1-208ENST00000525841 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
CELF1-208ENST00000525841 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
CELF1-208ENST00000525841 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.12
CELF1-208ENST00000525841 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
CELF1-208ENST00000525841 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
CELF1-208ENST00000525841 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
CELF1-208ENST00000525841 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
CELF1-208ENST00000525841 WIZO95785 1651 aa28.02■■■□□ 2.08
CELF1-208ENST00000525841 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
CELF1-208ENST00000525841 NESP48681 1621 aa27.86■■■□□ 2.05
CELF1-208ENST00000525841 TOP2AP11388 1531 aaKnown RBP27.64■■■□□ 2.02
CELF1-208ENST00000525841 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.01
CELF1-208ENST00000525841 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
CELF1-208ENST00000525841 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
CELF1-208ENST00000525841 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
CELF1-208ENST00000525841 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
CELF1-208ENST00000525841 CUX2O14529 1486 aa27.44■■□□□ 1.98
CELF1-208ENST00000525841 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
CELF1-208ENST00000525841 CFTRP13569 1480 aa27.36■■□□□ 1.97
CELF1-208ENST00000525841 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
CELF1-208ENST00000525841 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
CELF1-208ENST00000525841 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
CELF1-208ENST00000525841 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
CELF1-208ENST00000525841 WDR62O43379 1518 aa27.16■■□□□ 1.94
CELF1-208ENST00000525841 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
CELF1-208ENST00000525841 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
CELF1-208ENST00000525841 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
CELF1-208ENST00000525841 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
CELF1-208ENST00000525841 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
CELF1-208ENST00000525841 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
CELF1-208ENST00000525841 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
CELF1-208ENST00000525841 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
CELF1-208ENST00000525841 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
CELF1-208ENST00000525841 CUX1P39880 1505 aa26.58■■□□□ 1.85
CELF1-208ENST00000525841 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
CELF1-208ENST00000525841 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
CELF1-208ENST00000525841 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
CELF1-208ENST00000525841 EIF4G3O43432 1585 aaKnown RBP26.48■■□□□ 1.83
CELF1-208ENST00000525841 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
CELF1-208ENST00000525841 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.823e-8■□□□□ 11.2
CELF1-208ENST00000525841 SOGA1O94964 1423 aa26.38■■□□□ 1.81
CELF1-208ENST00000525841 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
CELF1-208ENST00000525841 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
CELF1-208ENST00000525841 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
CELF1-208ENST00000525841 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
CELF1-208ENST00000525841 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
CELF1-208ENST00000525841 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
CELF1-208ENST00000525841 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
CELF1-208ENST00000525841 CHD1O14646 1710 aa26.2■■□□□ 1.79
CELF1-208ENST00000525841 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
CELF1-208ENST00000525841 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
CELF1-208ENST00000525841 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
CELF1-208ENST00000525841 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
CELF1-208ENST00000525841 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
CELF1-208ENST00000525841 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
CELF1-208ENST00000525841 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
CELF1-208ENST00000525841 FBLN2P98095 1184 aa25.99■■□□□ 1.75
CELF1-208ENST00000525841 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
CELF1-208ENST00000525841 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
CELF1-208ENST00000525841 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
CELF1-208ENST00000525841 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
CELF1-208ENST00000525841 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CELF1-208ENST00000525841 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
CELF1-208ENST00000525841 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
CELF1-208ENST00000525841 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
CELF1-208ENST00000525841 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
CELF1-208ENST00000525841 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
CELF1-208ENST00000525841 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
CELF1-208ENST00000525841 FHAD1B1AJZ9 1412 aa25.76■■□□□ 1.71
CELF1-208ENST00000525841 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
CELF1-208ENST00000525841 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
CELF1-208ENST00000525841 NUP160Q12769 1436 aa25.72■■□□□ 1.71
CELF1-208ENST00000525841 IGF1RP08069 1367 aa25.66■■□□□ 1.7
CELF1-208ENST00000525841 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
CELF1-208ENST00000525841 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
CELF1-208ENST00000525841 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
CELF1-208ENST00000525841 SHROOM2Q13796 1616 aa25.58■■□□□ 1.69
CELF1-208ENST00000525841 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
CELF1-208ENST00000525841 CUL7Q14999 1698 aa25.55■■□□□ 1.68
CELF1-208ENST00000525841 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms