RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
RPUSD4-202ENST00000525812 ABCC9O60706 1549 aa17.17■□□□□ 0.34
RPUSD4-202ENST00000525812 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
RPUSD4-202ENST00000525812 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
RPUSD4-202ENST00000525812 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
RPUSD4-202ENST00000525812 NACADO15069 1562 aa16.21■□□□□ 0.19
RPUSD4-202ENST00000525812 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
RPUSD4-202ENST00000525812 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
RPUSD4-202ENST00000525812 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
RPUSD4-202ENST00000525812 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
RPUSD4-202ENST00000525812 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
RPUSD4-202ENST00000525812 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
RPUSD4-202ENST00000525812 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
RPUSD4-202ENST00000525812 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
RPUSD4-202ENST00000525812 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
RPUSD4-202ENST00000525812 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
RPUSD4-202ENST00000525812 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
RPUSD4-202ENST00000525812 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
RPUSD4-202ENST00000525812 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
RPUSD4-202ENST00000525812 NCAPD3P42695 1498 aa15.03■□□□□ -0
RPUSD4-202ENST00000525812 CUX2O14529 1486 aa15.01□□□□□ -0.01
RPUSD4-202ENST00000525812 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
RPUSD4-202ENST00000525812 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
RPUSD4-202ENST00000525812 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
RPUSD4-202ENST00000525812 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
RPUSD4-202ENST00000525812 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
RPUSD4-202ENST00000525812 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
RPUSD4-202ENST00000525812 NESP48681 1621 aa14.69□□□□□ -0.06
RPUSD4-202ENST00000525812 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
RPUSD4-202ENST00000525812 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
RPUSD4-202ENST00000525812 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
RPUSD4-202ENST00000525812 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
RPUSD4-202ENST00000525812 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
RPUSD4-202ENST00000525812 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
RPUSD4-202ENST00000525812 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
RPUSD4-202ENST00000525812 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
RPUSD4-202ENST00000525812 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
RPUSD4-202ENST00000525812 WDR62O43379 1518 aa14.4□□□□□ -0.1
RPUSD4-202ENST00000525812 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
RPUSD4-202ENST00000525812 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
RPUSD4-202ENST00000525812 CFTRP13569 1480 aa14.31□□□□□ -0.12
RPUSD4-202ENST00000525812 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
RPUSD4-202ENST00000525812 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
RPUSD4-202ENST00000525812 WIZO95785 1651 aa14.24□□□□□ -0.13
RPUSD4-202ENST00000525812 RSF1Q96T23 1441 aaPredicted RBP14.19□□□□□ -0.14
RPUSD4-202ENST00000525812 URB2Q14146 1524 aaKnown RBP14.17□□□□□ -0.14
RPUSD4-202ENST00000525812 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
RPUSD4-202ENST00000525812 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
RPUSD4-202ENST00000525812 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
RPUSD4-202ENST00000525812 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
RPUSD4-202ENST00000525812 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
RPUSD4-202ENST00000525812 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
RPUSD4-202ENST00000525812 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
RPUSD4-202ENST00000525812 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
RPUSD4-202ENST00000525812 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
RPUSD4-202ENST00000525812 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
RPUSD4-202ENST00000525812 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
RPUSD4-202ENST00000525812 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
RPUSD4-202ENST00000525812 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
RPUSD4-202ENST00000525812 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■■□ 19.7
RPUSD4-202ENST00000525812 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-202ENST00000525812 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-202ENST00000525812 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
RPUSD4-202ENST00000525812 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
RPUSD4-202ENST00000525812 SOGA1O94964 1423 aa13.8□□□□□ -0.2
RPUSD4-202ENST00000525812 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
RPUSD4-202ENST00000525812 FBLN2P98095 1184 aa13.79□□□□□ -0.2
RPUSD4-202ENST00000525812 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
RPUSD4-202ENST00000525812 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
RPUSD4-202ENST00000525812 CHD1O14646 1710 aa13.76□□□□□ -0.21
RPUSD4-202ENST00000525812 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
RPUSD4-202ENST00000525812 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
RPUSD4-202ENST00000525812 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
RPUSD4-202ENST00000525812 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
RPUSD4-202ENST00000525812 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
RPUSD4-202ENST00000525812 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
RPUSD4-202ENST00000525812 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
RPUSD4-202ENST00000525812 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
RPUSD4-202ENST00000525812 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
RPUSD4-202ENST00000525812 CUX1P39880 1505 aa13.64□□□□□ -0.23
RPUSD4-202ENST00000525812 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
RPUSD4-202ENST00000525812 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
RPUSD4-202ENST00000525812 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
RPUSD4-202ENST00000525812 NUP160Q12769 1436 aa13.52□□□□□ -0.25
RPUSD4-202ENST00000525812 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
RPUSD4-202ENST00000525812 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
RPUSD4-202ENST00000525812 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
RPUSD4-202ENST00000525812 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
RPUSD4-202ENST00000525812 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
RPUSD4-202ENST00000525812 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
RPUSD4-202ENST00000525812 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
RPUSD4-202ENST00000525812 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
RPUSD4-202ENST00000525812 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
RPUSD4-202ENST00000525812 ERICH3Q5RHP9 1530 aa13.41□□□□□ -0.26
RPUSD4-202ENST00000525812 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
RPUSD4-202ENST00000525812 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
RPUSD4-202ENST00000525812 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
RPUSD4-202ENST00000525812 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
RPUSD4-202ENST00000525812 ABCC10Q5T3U5 1492 aa13.32□□□□□ -0.28
RPUSD4-202ENST00000525812 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms