RNA–Protein interactions for RNA: ENST00000525704.2

KIRREL3-202, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KIRREL3, Length 2,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-202ENST00000525704 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
KIRREL3-202ENST00000525704 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
KIRREL3-202ENST00000525704 ABCC9O60706 1549 aa26.52■■□□□ 1.84
KIRREL3-202ENST00000525704 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
KIRREL3-202ENST00000525704 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
KIRREL3-202ENST00000525704 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
KIRREL3-202ENST00000525704 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
KIRREL3-202ENST00000525704 NACADO15069 1562 aa25.99■■□□□ 1.75
KIRREL3-202ENST00000525704 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
KIRREL3-202ENST00000525704 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
KIRREL3-202ENST00000525704 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
KIRREL3-202ENST00000525704 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
KIRREL3-202ENST00000525704 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
KIRREL3-202ENST00000525704 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.57
KIRREL3-202ENST00000525704 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
KIRREL3-202ENST00000525704 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
KIRREL3-202ENST00000525704 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
KIRREL3-202ENST00000525704 HRCP23327 699 aa24.41■■□□□ 1.5
KIRREL3-202ENST00000525704 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
KIRREL3-202ENST00000525704 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
KIRREL3-202ENST00000525704 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
KIRREL3-202ENST00000525704 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
KIRREL3-202ENST00000525704 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
KIRREL3-202ENST00000525704 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
KIRREL3-202ENST00000525704 WIZO95785 1651 aa24.18■■□□□ 1.46
KIRREL3-202ENST00000525704 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
KIRREL3-202ENST00000525704 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
KIRREL3-202ENST00000525704 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
KIRREL3-202ENST00000525704 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
KIRREL3-202ENST00000525704 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
KIRREL3-202ENST00000525704 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
KIRREL3-202ENST00000525704 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
KIRREL3-202ENST00000525704 MYT1Q01538 1121 aa23.85■■□□□ 1.41
KIRREL3-202ENST00000525704 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
KIRREL3-202ENST00000525704 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
KIRREL3-202ENST00000525704 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
KIRREL3-202ENST00000525704 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
KIRREL3-202ENST00000525704 CFTRP13569 1480 aa23.32■■□□□ 1.32
KIRREL3-202ENST00000525704 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
KIRREL3-202ENST00000525704 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
KIRREL3-202ENST00000525704 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
KIRREL3-202ENST00000525704 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
KIRREL3-202ENST00000525704 NESP48681 1621 aa23.18■■□□□ 1.3
KIRREL3-202ENST00000525704 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
KIRREL3-202ENST00000525704 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
KIRREL3-202ENST00000525704 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
KIRREL3-202ENST00000525704 ABCC8Q09428 1581 aa23■■□□□ 1.27
KIRREL3-202ENST00000525704 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
KIRREL3-202ENST00000525704 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
KIRREL3-202ENST00000525704 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
KIRREL3-202ENST00000525704 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.26
KIRREL3-202ENST00000525704 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
KIRREL3-202ENST00000525704 CUX1P39880 1505 aa22.85■■□□□ 1.25
KIRREL3-202ENST00000525704 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
KIRREL3-202ENST00000525704 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
KIRREL3-202ENST00000525704 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
KIRREL3-202ENST00000525704 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
KIRREL3-202ENST00000525704 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
KIRREL3-202ENST00000525704 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
KIRREL3-202ENST00000525704 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
KIRREL3-202ENST00000525704 MRC2Q9UBG0 1479 aa22.75■■□□□ 1.23
KIRREL3-202ENST00000525704 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
KIRREL3-202ENST00000525704 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
KIRREL3-202ENST00000525704 WDR62O43379 1518 aa22.68■■□□□ 1.22
KIRREL3-202ENST00000525704 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
KIRREL3-202ENST00000525704 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
KIRREL3-202ENST00000525704 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
KIRREL3-202ENST00000525704 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
KIRREL3-202ENST00000525704 SOGA1O94964 1423 aa22.5■■□□□ 1.19
KIRREL3-202ENST00000525704 CUX2O14529 1486 aa22.5■■□□□ 1.19
KIRREL3-202ENST00000525704 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
KIRREL3-202ENST00000525704 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
KIRREL3-202ENST00000525704 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
KIRREL3-202ENST00000525704 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
KIRREL3-202ENST00000525704 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
KIRREL3-202ENST00000525704 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
KIRREL3-202ENST00000525704 EEA1Q15075 1411 aa22.42■■□□□ 1.18
KIRREL3-202ENST00000525704 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
KIRREL3-202ENST00000525704 GTF3C3Q9Y5Q9 886 aa22.41■■□□□ 1.18
KIRREL3-202ENST00000525704 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
KIRREL3-202ENST00000525704 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
KIRREL3-202ENST00000525704 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
KIRREL3-202ENST00000525704 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
KIRREL3-202ENST00000525704 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
KIRREL3-202ENST00000525704 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
KIRREL3-202ENST00000525704 ZNF608Q9ULD9 1512 aaPredicted RBP22.27■■□□□ 1.16
KIRREL3-202ENST00000525704 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
KIRREL3-202ENST00000525704 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
KIRREL3-202ENST00000525704 IGF1RP08069 1367 aa22.23■■□□□ 1.15
KIRREL3-202ENST00000525704 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
KIRREL3-202ENST00000525704 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
KIRREL3-202ENST00000525704 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
KIRREL3-202ENST00000525704 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
KIRREL3-202ENST00000525704 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
KIRREL3-202ENST00000525704 KIF21BO75037 1637 aa22.17■■□□□ 1.14
KIRREL3-202ENST00000525704 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
KIRREL3-202ENST00000525704 CUL7Q14999 1698 aa22.14■■□□□ 1.14
KIRREL3-202ENST00000525704 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
KIRREL3-202ENST00000525704 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
KIRREL3-202ENST00000525704 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms