RNA–Protein interactions for RNA: ENST00000525571.1

FDFT1-206, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-206ENST00000525571 NISCHQ9Y2I1 1504 aa46.85■■■■■ 5.09
FDFT1-206ENST00000525571 ABCC9O60706 1549 aa42.23■■■■■ 4.35
FDFT1-206ENST00000525571 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
FDFT1-206ENST00000525571 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
FDFT1-206ENST00000525571 NACADO15069 1562 aa39.81■■■■□ 3.96
FDFT1-206ENST00000525571 DNAJC5BQ9UF47 199 aa39.8■■■■□ 3.96
FDFT1-206ENST00000525571 DCAF8L2P0C7V8 631 aa39.55■■■■□ 3.92
FDFT1-206ENST00000525571 UNC13AQ9UPW8 1703 aa39.31■■■■□ 3.88
FDFT1-206ENST00000525571 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
FDFT1-206ENST00000525571 MYO15BQ96JP2 1530 aa39.23■■■■□ 3.87
FDFT1-206ENST00000525571 BICRAQ9NZM4 1560 aa39.03■■■■□ 3.84
FDFT1-206ENST00000525571 ZCCHC6Q5VYS8 1495 aaKnown RBP38.81■■■■□ 3.8
FDFT1-206ENST00000525571 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
FDFT1-206ENST00000525571 SHROOM4Q9ULL8 1493 aa38.39■■■■□ 3.74
FDFT1-206ENST00000525571 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
FDFT1-206ENST00000525571 CC2D2AQ9P2K1 1620 aa38.16■■■■□ 3.7
FDFT1-206ENST00000525571 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
FDFT1-206ENST00000525571 EIF4G1Q04637 1599 aaKnown RBP38.04■■■■□ 3.68
FDFT1-206ENST00000525571 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
FDFT1-206ENST00000525571 ATAD2BQ9ULI0 1458 aa36.66■■■■□ 3.46
FDFT1-206ENST00000525571 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
FDFT1-206ENST00000525571 DNAJC5Q9H3Z4 198 aa36.57■■■■□ 3.44
FDFT1-206ENST00000525571 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
FDFT1-206ENST00000525571 HMGXB3Q12766 1538 aa36.48■■■■□ 3.43
FDFT1-206ENST00000525571 CUX2O14529 1486 aa36.43■■■■□ 3.42
FDFT1-206ENST00000525571 ERCC6Q03468 1493 aa36.42■■■■□ 3.42
FDFT1-206ENST00000525571 BAZ1AQ9NRL2 1556 aaPredicted RBP36.35■■■■□ 3.41
FDFT1-206ENST00000525571 NESP48681 1621 aa36.27■■■■□ 3.4
FDFT1-206ENST00000525571 BAZ1BQ9UIG0 1483 aaKnown RBP36.25■■■■□ 3.39
FDFT1-206ENST00000525571 PEG3Q9GZU2 1588 aa36.23■■■■□ 3.39
FDFT1-206ENST00000525571 MROH2BQ7Z745 1585 aa36.13■■■■□ 3.37
FDFT1-206ENST00000525571 LAMC3Q9Y6N6 1575 aa35.94■■■■□ 3.34
FDFT1-206ENST00000525571 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
FDFT1-206ENST00000525571 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
FDFT1-206ENST00000525571 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
FDFT1-206ENST00000525571 WIZO95785 1651 aa35.7■■■■□ 3.31
FDFT1-206ENST00000525571 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
FDFT1-206ENST00000525571 MRC2Q9UBG0 1479 aa35.44■■■■□ 3.26
FDFT1-206ENST00000525571 WDR62O43379 1518 aa35.39■■■■□ 3.26
FDFT1-206ENST00000525571 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
FDFT1-206ENST00000525571 CEP164Q9UPV0 1460 aa35.27■■■■□ 3.24
FDFT1-206ENST00000525571 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
FDFT1-206ENST00000525571 CFTRP13569 1480 aa35.22■■■■□ 3.23
FDFT1-206ENST00000525571 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
FDFT1-206ENST00000525571 URB2Q14146 1524 aaKnown RBP34.99■■■■□ 3.19
FDFT1-206ENST00000525571 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
FDFT1-206ENST00000525571 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
FDFT1-206ENST00000525571 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
FDFT1-206ENST00000525571 OSCARQ8IYS5 282 aa34.72■■■■□ 3.15
FDFT1-206ENST00000525571 ZNF608Q9ULD9 1512 aaPredicted RBP34.59■■■■□ 3.13
FDFT1-206ENST00000525571 TOPBP1Q92547 1522 aa34.58■■■■□ 3.13
FDFT1-206ENST00000525571 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
FDFT1-206ENST00000525571 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
FDFT1-206ENST00000525571 DNMBPQ6XZF7 1577 aa34.42■■■■□ 3.1
FDFT1-206ENST00000525571 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
FDFT1-206ENST00000525571 RIMBP3CA6NJZ7 1639 aa34.35■■■■□ 3.09
FDFT1-206ENST00000525571 RIMBP3BA6NNM3 1639 aa34.35■■■■□ 3.09
FDFT1-206ENST00000525571 RIMBP3Q9UFD9 1639 aa34.35■■■■□ 3.09
FDFT1-206ENST00000525571 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
FDFT1-206ENST00000525571 AQRO60306 1485 aaKnown RBP eCLIP34.24■■■■□ 3.071e-13■■■■□ 22.3
FDFT1-206ENST00000525571 POLA1P09884 1462 aaPredicted RBP34.21■■■■□ 3.07
FDFT1-206ENST00000525571 ARHGEF11O15085 1522 aa34.21■■■■□ 3.07
FDFT1-206ENST00000525571 CHD1O14646 1710 aa34.16■■■■□ 3.06
FDFT1-206ENST00000525571 RAD54L2Q9Y4B4 1467 aa34.11■■■■□ 3.05
FDFT1-206ENST00000525571 SOGA1O94964 1423 aa34.03■■■■□ 3.04
FDFT1-206ENST00000525571 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
FDFT1-206ENST00000525571 FBLN2P98095 1184 aa33.98■■■■□ 3.03
FDFT1-206ENST00000525571 FGD5Q6ZNL6 1462 aa33.97■■■■□ 3.03
FDFT1-206ENST00000525571 CUX1P39880 1505 aa33.94■■■■□ 3.02
FDFT1-206ENST00000525571 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
FDFT1-206ENST00000525571 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
FDFT1-206ENST00000525571 SNAPC4Q5SXM2 1469 aa33.88■■■■□ 3.01
FDFT1-206ENST00000525571 ARAP1Q96P48 1450 aa33.88■■■■□ 3.01
FDFT1-206ENST00000525571 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■□□ 2.99
FDFT1-206ENST00000525571 CLASP1Q7Z460 1538 aa33.75■■■□□ 2.99
FDFT1-206ENST00000525571 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
FDFT1-206ENST00000525571 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
FDFT1-206ENST00000525571 SYNJ1O43426 1573 aa33.68■■■□□ 2.98
FDFT1-206ENST00000525571 SYNJ2O15056 1496 aa33.65■■■□□ 2.98
FDFT1-206ENST00000525571 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
FDFT1-206ENST00000525571 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
FDFT1-206ENST00000525571 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
FDFT1-206ENST00000525571 ABCA10Q8WWZ4 1543 aa33.58■■■□□ 2.97
FDFT1-206ENST00000525571 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.96
FDFT1-206ENST00000525571 TRHP20396 242 aaPredicted RBP33.56■■■□□ 2.96
FDFT1-206ENST00000525571 WRNQ14191 1432 aaPredicted RBP eCLIP33.37■■■□□ 2.93
FDFT1-206ENST00000525571 BIVM-ERCC5R4GMW8 1640 aa33.36■■■□□ 2.93
FDFT1-206ENST00000525571 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
FDFT1-206ENST00000525571 GRIN2AQ12879 1464 aa33.32■■■□□ 2.92
FDFT1-206ENST00000525571 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
FDFT1-206ENST00000525571 ERCC6L2Q5T890 1561 aa33.26■■■□□ 2.91
FDFT1-206ENST00000525571 CEP170Q5SW79 1584 aa33.25■■■□□ 2.91
FDFT1-206ENST00000525571 NUP160Q12769 1436 aa33.23■■■□□ 2.91
FDFT1-206ENST00000525571 FHAD1B1AJZ9 1412 aa33.18■■■□□ 2.9
FDFT1-206ENST00000525571 ERICH3Q5RHP9 1530 aa33.14■■■□□ 2.9
FDFT1-206ENST00000525571 SHROOM2Q13796 1616 aa33.12■■■□□ 2.89
FDFT1-206ENST00000525571 PRG4Q92954 1404 aaPredicted RBP32.9■■■□□ 2.86
FDFT1-206ENST00000525571 JPH4Q96JJ6 628 aa32.87■■■□□ 2.85
FDFT1-206ENST00000525571 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
FDFT1-206ENST00000525571 KIF13AQ9H1H9 1805 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms