RNA–Protein interactions for RNA: ENST00000525396.5

CHEK1-207, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-207ENST00000525396 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
CHEK1-207ENST00000525396 CCDC180Q9P1Z9 1646 aa34.09■■■■□ 3.05
CHEK1-207ENST00000525396 ABCC9O60706 1549 aa33.25■■■□□ 2.91
CHEK1-207ENST00000525396 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
CHEK1-207ENST00000525396 NACADO15069 1562 aa31.95■■■□□ 2.71
CHEK1-207ENST00000525396 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
CHEK1-207ENST00000525396 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
CHEK1-207ENST00000525396 DCAF8L2P0C7V8 631 aa31.75■■■□□ 2.67
CHEK1-207ENST00000525396 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
CHEK1-207ENST00000525396 UNC13AQ9UPW8 1703 aa31.43■■■□□ 2.62
CHEK1-207ENST00000525396 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
CHEK1-207ENST00000525396 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
CHEK1-207ENST00000525396 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
CHEK1-207ENST00000525396 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
CHEK1-207ENST00000525396 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
CHEK1-207ENST00000525396 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
CHEK1-207ENST00000525396 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
CHEK1-207ENST00000525396 CECR2Q9BXF3 1484 aa29.85■■■□□ 2.37
CHEK1-207ENST00000525396 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
CHEK1-207ENST00000525396 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
CHEK1-207ENST00000525396 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
CHEK1-207ENST00000525396 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
CHEK1-207ENST00000525396 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
CHEK1-207ENST00000525396 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
CHEK1-207ENST00000525396 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
CHEK1-207ENST00000525396 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
CHEK1-207ENST00000525396 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
CHEK1-207ENST00000525396 WIZO95785 1651 aa29.22■■■□□ 2.27
CHEK1-207ENST00000525396 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
CHEK1-207ENST00000525396 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.22
CHEK1-207ENST00000525396 NESP48681 1621 aa28.81■■■□□ 2.2
CHEK1-207ENST00000525396 LAMC3Q9Y6N6 1575 aa28.73■■■□□ 2.19
CHEK1-207ENST00000525396 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
CHEK1-207ENST00000525396 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
CHEK1-207ENST00000525396 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
CHEK1-207ENST00000525396 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
CHEK1-207ENST00000525396 CFTRP13569 1480 aa28.45■■■□□ 2.14
CHEK1-207ENST00000525396 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
CHEK1-207ENST00000525396 PDS5BQ9NTI5 1447 aa28.44■■■□□ 2.14
CHEK1-207ENST00000525396 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
CHEK1-207ENST00000525396 CUX2O14529 1486 aa28.34■■■□□ 2.13
CHEK1-207ENST00000525396 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
CHEK1-207ENST00000525396 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
CHEK1-207ENST00000525396 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
CHEK1-207ENST00000525396 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
CHEK1-207ENST00000525396 WDR62O43379 1518 aa28.18■■■□□ 2.1
CHEK1-207ENST00000525396 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
CHEK1-207ENST00000525396 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
CHEK1-207ENST00000525396 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
CHEK1-207ENST00000525396 ABCC8Q09428 1581 aa27.78■■■□□ 2.04
CHEK1-207ENST00000525396 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
CHEK1-207ENST00000525396 CUX1P39880 1505 aa27.69■■■□□ 2.02
CHEK1-207ENST00000525396 IFT140Q96RY7 1462 aa27.64■■■□□ 2.02
CHEK1-207ENST00000525396 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
CHEK1-207ENST00000525396 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
CHEK1-207ENST00000525396 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
CHEK1-207ENST00000525396 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
CHEK1-207ENST00000525396 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
CHEK1-207ENST00000525396 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
CHEK1-207ENST00000525396 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
CHEK1-207ENST00000525396 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
CHEK1-207ENST00000525396 WDR97A6NE52 1622 aa27.47■■□□□ 1.99
CHEK1-207ENST00000525396 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
CHEK1-207ENST00000525396 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
CHEK1-207ENST00000525396 SOGA1O94964 1423 aa27.43■■□□□ 1.98
CHEK1-207ENST00000525396 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.975e-8■■■■■ 34.4
CHEK1-207ENST00000525396 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
CHEK1-207ENST00000525396 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
CHEK1-207ENST00000525396 TDRD9Q8NDG6 1382 aaKnown RBP27.28■■□□□ 1.96
CHEK1-207ENST00000525396 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
CHEK1-207ENST00000525396 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
CHEK1-207ENST00000525396 CHD1O14646 1710 aa27.2■■□□□ 1.94
CHEK1-207ENST00000525396 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
CHEK1-207ENST00000525396 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
CHEK1-207ENST00000525396 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
CHEK1-207ENST00000525396 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
CHEK1-207ENST00000525396 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
CHEK1-207ENST00000525396 ADAMTS12P58397 1594 aa27.01■■□□□ 1.91
CHEK1-207ENST00000525396 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
CHEK1-207ENST00000525396 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
CHEK1-207ENST00000525396 FBLN2P98095 1184 aa26.93■■□□□ 1.9
CHEK1-207ENST00000525396 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
CHEK1-207ENST00000525396 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
CHEK1-207ENST00000525396 GRIN2AQ12879 1464 aa26.84■■□□□ 1.89
CHEK1-207ENST00000525396 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
CHEK1-207ENST00000525396 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
CHEK1-207ENST00000525396 RIMBP3CA6NJZ7 1639 aa26.8■■□□□ 1.88
CHEK1-207ENST00000525396 RIMBP3BA6NNM3 1639 aa26.8■■□□□ 1.88
CHEK1-207ENST00000525396 RIMBP3Q9UFD9 1639 aa26.8■■□□□ 1.88
CHEK1-207ENST00000525396 CUL7Q14999 1698 aa26.77■■□□□ 1.88
CHEK1-207ENST00000525396 CEP170Q5SW79 1584 aa26.77■■□□□ 1.88
CHEK1-207ENST00000525396 ARHGEF11O15085 1522 aa26.76■■□□□ 1.87
CHEK1-207ENST00000525396 NUP160Q12769 1436 aa26.71■■□□□ 1.87
CHEK1-207ENST00000525396 IGF1RP08069 1367 aa26.71■■□□□ 1.87
CHEK1-207ENST00000525396 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
CHEK1-207ENST00000525396 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
CHEK1-207ENST00000525396 SHROOM2Q13796 1616 aa26.58■■□□□ 1.85
CHEK1-207ENST00000525396 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
CHEK1-207ENST00000525396 CARMIL1Q5VZK9 1371 aa26.55■■□□□ 1.84
CHEK1-207ENST00000525396 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms