RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
GPATCH4-212ENST00000525375 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
GPATCH4-212ENST00000525375 ABCC9O60706 1549 aa25.19■■□□□ 1.62
GPATCH4-212ENST00000525375 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
GPATCH4-212ENST00000525375 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
GPATCH4-212ENST00000525375 NACADO15069 1562 aa24.16■■□□□ 1.46
GPATCH4-212ENST00000525375 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
GPATCH4-212ENST00000525375 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
GPATCH4-212ENST00000525375 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
GPATCH4-212ENST00000525375 UNC13AQ9UPW8 1703 aa23.78■■□□□ 1.4
GPATCH4-212ENST00000525375 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
GPATCH4-212ENST00000525375 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
GPATCH4-212ENST00000525375 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
GPATCH4-212ENST00000525375 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
GPATCH4-212ENST00000525375 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
GPATCH4-212ENST00000525375 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
GPATCH4-212ENST00000525375 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
GPATCH4-212ENST00000525375 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
GPATCH4-212ENST00000525375 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
GPATCH4-212ENST00000525375 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
GPATCH4-212ENST00000525375 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
GPATCH4-212ENST00000525375 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
GPATCH4-212ENST00000525375 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
GPATCH4-212ENST00000525375 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
GPATCH4-212ENST00000525375 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
GPATCH4-212ENST00000525375 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
GPATCH4-212ENST00000525375 WIZO95785 1651 aa22.23■■□□□ 1.15
GPATCH4-212ENST00000525375 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
GPATCH4-212ENST00000525375 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
GPATCH4-212ENST00000525375 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
GPATCH4-212ENST00000525375 NESP48681 1621 aa21.88■■□□□ 1.09
GPATCH4-212ENST00000525375 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
GPATCH4-212ENST00000525375 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
GPATCH4-212ENST00000525375 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
GPATCH4-212ENST00000525375 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
GPATCH4-212ENST00000525375 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
GPATCH4-212ENST00000525375 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
GPATCH4-212ENST00000525375 CFTRP13569 1480 aa21.58■■□□□ 1.04
GPATCH4-212ENST00000525375 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
GPATCH4-212ENST00000525375 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
GPATCH4-212ENST00000525375 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
GPATCH4-212ENST00000525375 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
GPATCH4-212ENST00000525375 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
GPATCH4-212ENST00000525375 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
GPATCH4-212ENST00000525375 CUX2O14529 1486 aa21.35■■□□□ 1.01
GPATCH4-212ENST00000525375 WDR62O43379 1518 aa21.32■■□□□ 1
GPATCH4-212ENST00000525375 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
GPATCH4-212ENST00000525375 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
GPATCH4-212ENST00000525375 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
GPATCH4-212ENST00000525375 CUX1P39880 1505 aa21.06■□□□□ 0.96
GPATCH4-212ENST00000525375 ABCC8Q09428 1581 aa21■□□□□ 0.95
GPATCH4-212ENST00000525375 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
GPATCH4-212ENST00000525375 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
GPATCH4-212ENST00000525375 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
GPATCH4-212ENST00000525375 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
GPATCH4-212ENST00000525375 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
GPATCH4-212ENST00000525375 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
GPATCH4-212ENST00000525375 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
GPATCH4-212ENST00000525375 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
GPATCH4-212ENST00000525375 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
GPATCH4-212ENST00000525375 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
GPATCH4-212ENST00000525375 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
GPATCH4-212ENST00000525375 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
GPATCH4-212ENST00000525375 SOGA1O94964 1423 aa20.82■□□□□ 0.92
GPATCH4-212ENST00000525375 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.922e-7■■■■■ 31.6
GPATCH4-212ENST00000525375 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
GPATCH4-212ENST00000525375 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
GPATCH4-212ENST00000525375 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
GPATCH4-212ENST00000525375 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
GPATCH4-212ENST00000525375 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
GPATCH4-212ENST00000525375 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
GPATCH4-212ENST00000525375 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
GPATCH4-212ENST00000525375 CHD1O14646 1710 aa20.57■□□□□ 0.88
GPATCH4-212ENST00000525375 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
GPATCH4-212ENST00000525375 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
GPATCH4-212ENST00000525375 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
GPATCH4-212ENST00000525375 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
GPATCH4-212ENST00000525375 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
GPATCH4-212ENST00000525375 FBLN2P98095 1184 aa20.42■□□□□ 0.86
GPATCH4-212ENST00000525375 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
GPATCH4-212ENST00000525375 RUSC2Q8N2Y8 1516 aa20.39■□□□□ 0.85
GPATCH4-212ENST00000525375 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
GPATCH4-212ENST00000525375 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
GPATCH4-212ENST00000525375 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
GPATCH4-212ENST00000525375 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
GPATCH4-212ENST00000525375 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
GPATCH4-212ENST00000525375 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
GPATCH4-212ENST00000525375 IGF1RP08069 1367 aa20.33■□□□□ 0.84
GPATCH4-212ENST00000525375 CEP170Q5SW79 1584 aa20.31■□□□□ 0.84
GPATCH4-212ENST00000525375 CUL7Q14999 1698 aa20.28■□□□□ 0.84
GPATCH4-212ENST00000525375 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
GPATCH4-212ENST00000525375 NUP160Q12769 1436 aa20.26■□□□□ 0.83
GPATCH4-212ENST00000525375 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
GPATCH4-212ENST00000525375 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
GPATCH4-212ENST00000525375 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
GPATCH4-212ENST00000525375 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
GPATCH4-212ENST00000525375 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
GPATCH4-212ENST00000525375 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
GPATCH4-212ENST00000525375 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
GPATCH4-212ENST00000525375 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms