RNA–Protein interactions for RNA: ENST00000525279.5

C11orf49-206, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-206ENST00000525279 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
C11orf49-206ENST00000525279 ABCC9O60706 1549 aa24.1■■□□□ 1.45
C11orf49-206ENST00000525279 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
C11orf49-206ENST00000525279 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
C11orf49-206ENST00000525279 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
C11orf49-206ENST00000525279 NACADO15069 1562 aa22.63■■□□□ 1.21
C11orf49-206ENST00000525279 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
C11orf49-206ENST00000525279 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
C11orf49-206ENST00000525279 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
C11orf49-206ENST00000525279 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
C11orf49-206ENST00000525279 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
C11orf49-206ENST00000525279 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
C11orf49-206ENST00000525279 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
C11orf49-206ENST00000525279 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
C11orf49-206ENST00000525279 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
C11orf49-206ENST00000525279 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
C11orf49-206ENST00000525279 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
C11orf49-206ENST00000525279 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
C11orf49-206ENST00000525279 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
C11orf49-206ENST00000525279 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
C11orf49-206ENST00000525279 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
C11orf49-206ENST00000525279 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
C11orf49-206ENST00000525279 CUX2O14529 1486 aa20.75■□□□□ 0.91
C11orf49-206ENST00000525279 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
C11orf49-206ENST00000525279 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
C11orf49-206ENST00000525279 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
C11orf49-206ENST00000525279 NESP48681 1621 aa20.71■□□□□ 0.91
C11orf49-206ENST00000525279 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
C11orf49-206ENST00000525279 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
C11orf49-206ENST00000525279 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
C11orf49-206ENST00000525279 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
C11orf49-206ENST00000525279 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
C11orf49-206ENST00000525279 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
C11orf49-206ENST00000525279 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
C11orf49-206ENST00000525279 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
C11orf49-206ENST00000525279 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
C11orf49-206ENST00000525279 WIZO95785 1651 aa20.29■□□□□ 0.84
C11orf49-206ENST00000525279 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
C11orf49-206ENST00000525279 WDR62O43379 1518 aa20.16■□□□□ 0.82
C11orf49-206ENST00000525279 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
C11orf49-206ENST00000525279 CFTRP13569 1480 aa20.07■□□□□ 0.8
C11orf49-206ENST00000525279 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
C11orf49-206ENST00000525279 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
C11orf49-206ENST00000525279 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
C11orf49-206ENST00000525279 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
C11orf49-206ENST00000525279 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
C11orf49-206ENST00000525279 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
C11orf49-206ENST00000525279 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
C11orf49-206ENST00000525279 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
C11orf49-206ENST00000525279 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
C11orf49-206ENST00000525279 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
C11orf49-206ENST00000525279 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
C11orf49-206ENST00000525279 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
C11orf49-206ENST00000525279 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
C11orf49-206ENST00000525279 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
C11orf49-206ENST00000525279 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
C11orf49-206ENST00000525279 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
C11orf49-206ENST00000525279 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
C11orf49-206ENST00000525279 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
C11orf49-206ENST00000525279 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
C11orf49-206ENST00000525279 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
C11orf49-206ENST00000525279 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
C11orf49-206ENST00000525279 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
C11orf49-206ENST00000525279 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
C11orf49-206ENST00000525279 CHD1O14646 1710 aa19.38■□□□□ 0.69
C11orf49-206ENST00000525279 SOGA1O94964 1423 aa19.38■□□□□ 0.69
C11orf49-206ENST00000525279 CYB5RLQ6IPT4 315 aa19.38■□□□□ 0.69
C11orf49-206ENST00000525279 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
C11orf49-206ENST00000525279 FBLN2P98095 1184 aa19.34■□□□□ 0.69
C11orf49-206ENST00000525279 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
C11orf49-206ENST00000525279 CUX1P39880 1505 aa19.33■□□□□ 0.68
C11orf49-206ENST00000525279 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
C11orf49-206ENST00000525279 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
C11orf49-206ENST00000525279 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
C11orf49-206ENST00000525279 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
C11orf49-206ENST00000525279 MAGI1Q96QZ7 1491 aaPredicted RBP19.19■□□□□ 0.66
C11orf49-206ENST00000525279 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
C11orf49-206ENST00000525279 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
C11orf49-206ENST00000525279 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
C11orf49-206ENST00000525279 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
C11orf49-206ENST00000525279 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
C11orf49-206ENST00000525279 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
C11orf49-206ENST00000525279 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
C11orf49-206ENST00000525279 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
C11orf49-206ENST00000525279 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
C11orf49-206ENST00000525279 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
C11orf49-206ENST00000525279 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
C11orf49-206ENST00000525279 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
C11orf49-206ENST00000525279 NUP160Q12769 1436 aa18.94■□□□□ 0.62
C11orf49-206ENST00000525279 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
C11orf49-206ENST00000525279 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
C11orf49-206ENST00000525279 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
C11orf49-206ENST00000525279 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
C11orf49-206ENST00000525279 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
C11orf49-206ENST00000525279 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
C11orf49-206ENST00000525279 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
C11orf49-206ENST00000525279 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
C11orf49-206ENST00000525279 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
C11orf49-206ENST00000525279 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
C11orf49-206ENST00000525279 IGF1RP08069 1367 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms