RNA–Protein interactions for RNA: ENST00000525152.1

PPP6R3-208, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 2

Gene PPP6R3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-208ENST00000525152 NISCHQ9Y2I1 1504 aa37.17■■■■□ 3.54
PPP6R3-208ENST00000525152 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
PPP6R3-208ENST00000525152 ABCC9O60706 1549 aa33.12■■■□□ 2.89
PPP6R3-208ENST00000525152 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
PPP6R3-208ENST00000525152 NACADO15069 1562 aa31.47■■■□□ 2.63
PPP6R3-208ENST00000525152 DCAF8L2P0C7V8 631 aa31.37■■■□□ 2.61
PPP6R3-208ENST00000525152 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
PPP6R3-208ENST00000525152 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
PPP6R3-208ENST00000525152 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
PPP6R3-208ENST00000525152 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
PPP6R3-208ENST00000525152 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
PPP6R3-208ENST00000525152 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
PPP6R3-208ENST00000525152 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
PPP6R3-208ENST00000525152 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
PPP6R3-208ENST00000525152 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
PPP6R3-208ENST00000525152 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
PPP6R3-208ENST00000525152 EIF4G1Q04637 1599 aaKnown RBP29.9■■■□□ 2.38
PPP6R3-208ENST00000525152 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
PPP6R3-208ENST00000525152 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
PPP6R3-208ENST00000525152 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
PPP6R3-208ENST00000525152 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
PPP6R3-208ENST00000525152 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
PPP6R3-208ENST00000525152 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
PPP6R3-208ENST00000525152 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
PPP6R3-208ENST00000525152 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
PPP6R3-208ENST00000525152 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
PPP6R3-208ENST00000525152 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
PPP6R3-208ENST00000525152 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
PPP6R3-208ENST00000525152 CUX2O14529 1486 aa28.55■■■□□ 2.16
PPP6R3-208ENST00000525152 NESP48681 1621 aa28.47■■■□□ 2.15
PPP6R3-208ENST00000525152 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
PPP6R3-208ENST00000525152 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
PPP6R3-208ENST00000525152 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
PPP6R3-208ENST00000525152 WIZO95785 1651 aa28.24■■■□□ 2.11
PPP6R3-208ENST00000525152 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
PPP6R3-208ENST00000525152 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
PPP6R3-208ENST00000525152 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
PPP6R3-208ENST00000525152 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
PPP6R3-208ENST00000525152 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
PPP6R3-208ENST00000525152 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
PPP6R3-208ENST00000525152 CFTRP13569 1480 aa27.89■■■□□ 2.06
PPP6R3-208ENST00000525152 CEP164Q9UPV0 1460 aa27.84■■■□□ 2.05
PPP6R3-208ENST00000525152 WDR62O43379 1518 aa27.84■■■□□ 2.05
PPP6R3-208ENST00000525152 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
PPP6R3-208ENST00000525152 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
PPP6R3-208ENST00000525152 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
PPP6R3-208ENST00000525152 PRDM2Q13029 1718 aa27.51■■□□□ 1.99
PPP6R3-208ENST00000525152 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
PPP6R3-208ENST00000525152 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
PPP6R3-208ENST00000525152 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
PPP6R3-208ENST00000525152 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
PPP6R3-208ENST00000525152 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
PPP6R3-208ENST00000525152 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
PPP6R3-208ENST00000525152 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
PPP6R3-208ENST00000525152 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
PPP6R3-208ENST00000525152 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
PPP6R3-208ENST00000525152 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
PPP6R3-208ENST00000525152 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.912e-9■■■■■ 27.6
PPP6R3-208ENST00000525152 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
PPP6R3-208ENST00000525152 SOGA1O94964 1423 aa26.98■■□□□ 1.91
PPP6R3-208ENST00000525152 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
PPP6R3-208ENST00000525152 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
PPP6R3-208ENST00000525152 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
PPP6R3-208ENST00000525152 CUX1P39880 1505 aa26.86■■□□□ 1.89
PPP6R3-208ENST00000525152 FBLN2P98095 1184 aa26.84■■□□□ 1.89
PPP6R3-208ENST00000525152 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
PPP6R3-208ENST00000525152 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
PPP6R3-208ENST00000525152 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
PPP6R3-208ENST00000525152 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
PPP6R3-208ENST00000525152 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
PPP6R3-208ENST00000525152 CHD1O14646 1710 aa26.76■■□□□ 1.88
PPP6R3-208ENST00000525152 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
PPP6R3-208ENST00000525152 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
PPP6R3-208ENST00000525152 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
PPP6R3-208ENST00000525152 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
PPP6R3-208ENST00000525152 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
PPP6R3-208ENST00000525152 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
PPP6R3-208ENST00000525152 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
PPP6R3-208ENST00000525152 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
PPP6R3-208ENST00000525152 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
PPP6R3-208ENST00000525152 SYNJ1O43426 1573 aa26.55■■□□□ 1.84
PPP6R3-208ENST00000525152 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
PPP6R3-208ENST00000525152 ARAP1Q96P48 1450 aa26.51■■□□□ 1.83
PPP6R3-208ENST00000525152 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
PPP6R3-208ENST00000525152 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
PPP6R3-208ENST00000525152 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
PPP6R3-208ENST00000525152 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
PPP6R3-208ENST00000525152 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
PPP6R3-208ENST00000525152 TRHP20396 242 aaPredicted RBP26.31■■□□□ 1.8
PPP6R3-208ENST00000525152 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
PPP6R3-208ENST00000525152 ERICH3Q5RHP9 1530 aa26.29■■□□□ 1.8
PPP6R3-208ENST00000525152 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
PPP6R3-208ENST00000525152 NUP160Q12769 1436 aa26.25■■□□□ 1.79
PPP6R3-208ENST00000525152 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
PPP6R3-208ENST00000525152 SHROOM2Q13796 1616 aa26.08■■□□□ 1.77
PPP6R3-208ENST00000525152 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
PPP6R3-208ENST00000525152 JPH4Q96JJ6 628 aa26.07■■□□□ 1.76
PPP6R3-208ENST00000525152 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
PPP6R3-208ENST00000525152 IGF1RP08069 1367 aa26.03■■□□□ 1.76
PPP6R3-208ENST00000525152 PRG4Q92954 1404 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms