RNA–Protein interactions for RNA: ENST00000525100.1

NRIP3-202, Transcript of nuclear receptor interacting protein 3, humanhuman

TSL 4

Gene NRIP3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3-202ENST00000525100 NISCHQ9Y2I1 1504 aa47.46■■■■■ 5.19
NRIP3-202ENST00000525100 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.38
NRIP3-202ENST00000525100 ABCC9O60706 1549 aa41.79■■■■■ 4.28
NRIP3-202ENST00000525100 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
NRIP3-202ENST00000525100 NACADO15069 1562 aa39.92■■■■□ 3.98
NRIP3-202ENST00000525100 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
NRIP3-202ENST00000525100 MYO15BQ96JP2 1530 aa39.53■■■■□ 3.92
NRIP3-202ENST00000525100 ZCCHC6Q5VYS8 1495 aaKnown RBP39.46■■■■□ 3.91
NRIP3-202ENST00000525100 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
NRIP3-202ENST00000525100 UNC13AQ9UPW8 1703 aa39.14■■■■□ 3.86
NRIP3-202ENST00000525100 PABPN1Q86U42 306 aaKnown RBP eCLIP38.99■■■■□ 3.83
NRIP3-202ENST00000525100 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.8
NRIP3-202ENST00000525100 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
NRIP3-202ENST00000525100 DNAJC5BQ9UF47 199 aa38.6■■■■□ 3.77
NRIP3-202ENST00000525100 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
NRIP3-202ENST00000525100 EIF4G1Q04637 1599 aaKnown RBP37.85■■■■□ 3.65
NRIP3-202ENST00000525100 CC2D2AQ9P2K1 1620 aa37.79■■■■□ 3.64
NRIP3-202ENST00000525100 CECR2Q9BXF3 1484 aa37.59■■■■□ 3.61
NRIP3-202ENST00000525100 SMARCA4P51532 1647 aa36.92■■■■□ 3.5
NRIP3-202ENST00000525100 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
NRIP3-202ENST00000525100 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
NRIP3-202ENST00000525100 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
NRIP3-202ENST00000525100 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
NRIP3-202ENST00000525100 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
NRIP3-202ENST00000525100 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
NRIP3-202ENST00000525100 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
NRIP3-202ENST00000525100 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
NRIP3-202ENST00000525100 WIZO95785 1651 aa36.18■■■■□ 3.38
NRIP3-202ENST00000525100 ERCC6Q03468 1493 aa36.1■■■■□ 3.37
NRIP3-202ENST00000525100 NESP48681 1621 aa36.05■■■■□ 3.36
NRIP3-202ENST00000525100 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
NRIP3-202ENST00000525100 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
NRIP3-202ENST00000525100 CUX2O14529 1486 aa35.8■■■■□ 3.32
NRIP3-202ENST00000525100 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
NRIP3-202ENST00000525100 CADPSQ9ULU8 1353 aa35.73■■■■□ 3.31
NRIP3-202ENST00000525100 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
NRIP3-202ENST00000525100 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
NRIP3-202ENST00000525100 THOC2Q8NI27 1593 aaKnown RBP35.59■■■■□ 3.29
NRIP3-202ENST00000525100 CFTRP13569 1480 aa35.44■■■■□ 3.26
NRIP3-202ENST00000525100 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
NRIP3-202ENST00000525100 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
NRIP3-202ENST00000525100 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
NRIP3-202ENST00000525100 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
NRIP3-202ENST00000525100 WDR62O43379 1518 aa35.25■■■■□ 3.23
NRIP3-202ENST00000525100 PRDM2Q13029 1718 aa35.2■■■■□ 3.23
NRIP3-202ENST00000525100 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
NRIP3-202ENST00000525100 URB2Q14146 1524 aaKnown RBP34.99■■■■□ 3.19
NRIP3-202ENST00000525100 SUPT5HO00267 1087 aaKnown RBP34.89■■■■□ 3.18
NRIP3-202ENST00000525100 TOPBP1Q92547 1522 aa34.73■■■■□ 3.15
NRIP3-202ENST00000525100 ABCC8Q09428 1581 aa34.72■■■■□ 3.15
NRIP3-202ENST00000525100 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
NRIP3-202ENST00000525100 IFT140Q96RY7 1462 aa34.61■■■■□ 3.13
NRIP3-202ENST00000525100 ZNF608Q9ULD9 1512 aaPredicted RBP34.46■■■■□ 3.11
NRIP3-202ENST00000525100 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
NRIP3-202ENST00000525100 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
NRIP3-202ENST00000525100 EIF4G3O43432 1585 aaKnown RBP34.35■■■■□ 3.09
NRIP3-202ENST00000525100 CUX1P39880 1505 aa34.34■■■■□ 3.09
NRIP3-202ENST00000525100 FGD5Q6ZNL6 1462 aa34.29■■■■□ 3.08
NRIP3-202ENST00000525100 SOGA1O94964 1423 aa34.27■■■■□ 3.08
NRIP3-202ENST00000525100 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
NRIP3-202ENST00000525100 OSCARQ8IYS5 282 aa34.26■■■■□ 3.08
NRIP3-202ENST00000525100 AQRO60306 1485 aaKnown RBP eCLIP34.22■■■■□ 3.07
NRIP3-202ENST00000525100 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
NRIP3-202ENST00000525100 WDR97A6NE52 1622 aa34.11■■■■□ 3.05
NRIP3-202ENST00000525100 WRNQ14191 1432 aaPredicted RBP eCLIP34■■■■□ 3.03
NRIP3-202ENST00000525100 CHD1O14646 1710 aa33.99■■■■□ 3.03
NRIP3-202ENST00000525100 BIVM-ERCC5R4GMW8 1640 aa33.97■■■■□ 3.03
NRIP3-202ENST00000525100 TOP2BQ02880 1626 aa33.96■■■■□ 3.03
NRIP3-202ENST00000525100 FBLN2P98095 1184 aa33.94■■■■□ 3.02
NRIP3-202ENST00000525100 SNAPC4Q5SXM2 1469 aa33.93■■■■□ 3.02
NRIP3-202ENST00000525100 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
NRIP3-202ENST00000525100 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
NRIP3-202ENST00000525100 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
NRIP3-202ENST00000525100 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
NRIP3-202ENST00000525100 MAGI1Q96QZ7 1491 aaPredicted RBP33.87■■■■□ 3.01
NRIP3-202ENST00000525100 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
NRIP3-202ENST00000525100 TRIM41Q8WV44 630 aa33.84■■■■□ 3.01
NRIP3-202ENST00000525100 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
NRIP3-202ENST00000525100 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
NRIP3-202ENST00000525100 RIMBP3CA6NJZ7 1639 aa33.75■■■□□ 2.99
NRIP3-202ENST00000525100 RIMBP3BA6NNM3 1639 aa33.75■■■□□ 2.99
NRIP3-202ENST00000525100 RIMBP3Q9UFD9 1639 aa33.75■■■□□ 2.99
NRIP3-202ENST00000525100 SYNJ2O15056 1496 aa33.74■■■□□ 2.99
NRIP3-202ENST00000525100 ARHGEF11O15085 1522 aa33.7■■■□□ 2.99
NRIP3-202ENST00000525100 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
NRIP3-202ENST00000525100 ADAMTS12P58397 1594 aa33.55■■■□□ 2.96
NRIP3-202ENST00000525100 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
NRIP3-202ENST00000525100 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
NRIP3-202ENST00000525100 FHAD1B1AJZ9 1412 aa33.47■■■□□ 2.95
NRIP3-202ENST00000525100 CYB5RLQ6IPT4 315 aa33.41■■■□□ 2.94
NRIP3-202ENST00000525100 ARAP1Q96P48 1450 aa33.39■■■□□ 2.94
NRIP3-202ENST00000525100 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
NRIP3-202ENST00000525100 NUP160Q12769 1436 aa33.33■■■□□ 2.93
NRIP3-202ENST00000525100 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
NRIP3-202ENST00000525100 CUL7Q14999 1698 aa33.18■■■□□ 2.9
NRIP3-202ENST00000525100 IGF1RP08069 1367 aa33.18■■■□□ 2.9
NRIP3-202ENST00000525100 SHROOM2Q13796 1616 aa33.13■■■□□ 2.89
NRIP3-202ENST00000525100 ERCC6L2Q5T890 1561 aa33.09■■■□□ 2.89
NRIP3-202ENST00000525100 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
NRIP3-202ENST00000525100 CARMIL1Q5VZK9 1371 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms