RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
CTSB-208ENST00000525076 ABCC9O60706 1549 aa34.31■■■■□ 3.08
CTSB-208ENST00000525076 CCDC180Q9P1Z9 1646 aa34.25■■■■□ 3.07
CTSB-208ENST00000525076 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
CTSB-208ENST00000525076 NACADO15069 1562 aa32.41■■■□□ 2.78
CTSB-208ENST00000525076 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
CTSB-208ENST00000525076 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.75
CTSB-208ENST00000525076 PABPN1Q86U42 306 aaKnown RBP eCLIP31.93■■■□□ 2.7
CTSB-208ENST00000525076 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
CTSB-208ENST00000525076 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
CTSB-208ENST00000525076 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
CTSB-208ENST00000525076 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
CTSB-208ENST00000525076 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
CTSB-208ENST00000525076 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
CTSB-208ENST00000525076 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
CTSB-208ENST00000525076 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
CTSB-208ENST00000525076 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
CTSB-208ENST00000525076 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
CTSB-208ENST00000525076 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
CTSB-208ENST00000525076 ATAD2BQ9ULI0 1458 aa29.79■■■□□ 2.36
CTSB-208ENST00000525076 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
CTSB-208ENST00000525076 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
CTSB-208ENST00000525076 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
CTSB-208ENST00000525076 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
CTSB-208ENST00000525076 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
CTSB-208ENST00000525076 CUX2O14529 1486 aa29.63■■■□□ 2.33
CTSB-208ENST00000525076 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
CTSB-208ENST00000525076 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
CTSB-208ENST00000525076 PEG3Q9GZU2 1588 aa29.46■■■□□ 2.31
CTSB-208ENST00000525076 NESP48681 1621 aa29.43■■■□□ 2.3
CTSB-208ENST00000525076 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
CTSB-208ENST00000525076 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
CTSB-208ENST00000525076 THOC2Q8NI27 1593 aaKnown RBP29.16■■■□□ 2.26
CTSB-208ENST00000525076 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
CTSB-208ENST00000525076 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
CTSB-208ENST00000525076 WIZO95785 1651 aa29■■■□□ 2.23
CTSB-208ENST00000525076 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
CTSB-208ENST00000525076 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
CTSB-208ENST00000525076 WDR62O43379 1518 aa28.76■■■□□ 2.19
CTSB-208ENST00000525076 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
CTSB-208ENST00000525076 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
CTSB-208ENST00000525076 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
CTSB-208ENST00000525076 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
CTSB-208ENST00000525076 CFTRP13569 1480 aa28.64■■■□□ 2.17
CTSB-208ENST00000525076 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
CTSB-208ENST00000525076 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
CTSB-208ENST00000525076 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
CTSB-208ENST00000525076 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
CTSB-208ENST00000525076 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
CTSB-208ENST00000525076 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
CTSB-208ENST00000525076 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
CTSB-208ENST00000525076 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
CTSB-208ENST00000525076 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
CTSB-208ENST00000525076 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.07
CTSB-208ENST00000525076 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
CTSB-208ENST00000525076 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.05
CTSB-208ENST00000525076 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.05
CTSB-208ENST00000525076 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.05
CTSB-208ENST00000525076 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
CTSB-208ENST00000525076 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.043e-7■■■■■ 33.7
CTSB-208ENST00000525076 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
CTSB-208ENST00000525076 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
CTSB-208ENST00000525076 CHD1O14646 1710 aa27.75■■■□□ 2.03
CTSB-208ENST00000525076 SOGA1O94964 1423 aa27.71■■■□□ 2.03
CTSB-208ENST00000525076 FBLN2P98095 1184 aa27.71■■■□□ 2.03
CTSB-208ENST00000525076 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.03
CTSB-208ENST00000525076 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
CTSB-208ENST00000525076 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
CTSB-208ENST00000525076 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
CTSB-208ENST00000525076 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
CTSB-208ENST00000525076 CUX1P39880 1505 aa27.57■■■□□ 2
CTSB-208ENST00000525076 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
CTSB-208ENST00000525076 ARAP1Q96P48 1450 aa27.5■■□□□ 1.99
CTSB-208ENST00000525076 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
CTSB-208ENST00000525076 MAGI1Q96QZ7 1491 aaPredicted RBP27.49■■□□□ 1.99
CTSB-208ENST00000525076 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
CTSB-208ENST00000525076 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
CTSB-208ENST00000525076 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
CTSB-208ENST00000525076 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
CTSB-208ENST00000525076 SYNJ2O15056 1496 aa27.39■■□□□ 1.98
CTSB-208ENST00000525076 GAPVD1Q14C86 1478 aa27.37■■□□□ 1.97
CTSB-208ENST00000525076 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
CTSB-208ENST00000525076 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
CTSB-208ENST00000525076 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
CTSB-208ENST00000525076 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
CTSB-208ENST00000525076 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
CTSB-208ENST00000525076 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
CTSB-208ENST00000525076 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
CTSB-208ENST00000525076 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
CTSB-208ENST00000525076 ADAMTS12P58397 1594 aa27.08■■□□□ 1.93
CTSB-208ENST00000525076 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
CTSB-208ENST00000525076 NUP160Q12769 1436 aa27.01■■□□□ 1.91
CTSB-208ENST00000525076 CEP170Q5SW79 1584 aa27■■□□□ 1.91
CTSB-208ENST00000525076 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
CTSB-208ENST00000525076 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
CTSB-208ENST00000525076 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
CTSB-208ENST00000525076 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
CTSB-208ENST00000525076 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
CTSB-208ENST00000525076 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.86
CTSB-208ENST00000525076 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms