RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 NISCHQ9Y2I1 1504 aa46.76■■■■■ 5.08
UBXN1-204ENST00000524762 CCDC180Q9P1Z9 1646 aa41.74■■■■■ 4.27
UBXN1-204ENST00000524762 ABCC9O60706 1549 aa40.95■■■■■ 4.15
UBXN1-204ENST00000524762 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
UBXN1-204ENST00000524762 NACADO15069 1562 aa39.24■■■■□ 3.87
UBXN1-204ENST00000524762 MYO15BQ96JP2 1530 aa38.96■■■■□ 3.83
UBXN1-204ENST00000524762 DCAF8L2P0C7V8 631 aa38.96■■■■□ 3.83
UBXN1-204ENST00000524762 ZCCHC6Q5VYS8 1495 aaKnown RBP38.94■■■■□ 3.82
UBXN1-204ENST00000524762 DCAF1Q9Y4B6 1507 aa38.71■■■■□ 3.79
UBXN1-204ENST00000524762 UNC13AQ9UPW8 1703 aa38.53■■■■□ 3.76
UBXN1-204ENST00000524762 BICRAQ9NZM4 1560 aa38.2■■■■□ 3.71
UBXN1-204ENST00000524762 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.7
UBXN1-204ENST00000524762 SCRIBQ14160 1630 aa38.01■■■■□ 3.68
UBXN1-204ENST00000524762 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
UBXN1-204ENST00000524762 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
UBXN1-204ENST00000524762 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
UBXN1-204ENST00000524762 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
UBXN1-204ENST00000524762 CECR2Q9BXF3 1484 aa36.82■■■■□ 3.49
UBXN1-204ENST00000524762 SMARCA4P51532 1647 aa36.37■■■■□ 3.41
UBXN1-204ENST00000524762 BAZ1AQ9NRL2 1556 aaPredicted RBP36.26■■■■□ 3.39
UBXN1-204ENST00000524762 NCAPD3P42695 1498 aa36.19■■■■□ 3.38
UBXN1-204ENST00000524762 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
UBXN1-204ENST00000524762 SMARCA2P51531 1590 aa36.13■■■■□ 3.37
UBXN1-204ENST00000524762 HMGXB3Q12766 1538 aa36.04■■■■□ 3.36
UBXN1-204ENST00000524762 MROH2BQ7Z745 1585 aa36.04■■■■□ 3.36
UBXN1-204ENST00000524762 PEG3Q9GZU2 1588 aa36.03■■■■□ 3.36
UBXN1-204ENST00000524762 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
UBXN1-204ENST00000524762 WIZO95785 1651 aa35.66■■■■□ 3.3
UBXN1-204ENST00000524762 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
UBXN1-204ENST00000524762 NESP48681 1621 aa35.39■■■■□ 3.26
UBXN1-204ENST00000524762 LAMC3Q9Y6N6 1575 aa35.3■■■■□ 3.24
UBXN1-204ENST00000524762 ERCC6Q03468 1493 aa35.29■■■■□ 3.24
UBXN1-204ENST00000524762 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
UBXN1-204ENST00000524762 CADPSQ9ULU8 1353 aa35.09■■■■□ 3.21
UBXN1-204ENST00000524762 CUX2O14529 1486 aa35.05■■■■□ 3.2
UBXN1-204ENST00000524762 KIF21AQ7Z4S6 1674 aa35.03■■■■□ 3.2
UBXN1-204ENST00000524762 PDS5BQ9NTI5 1447 aa35■■■■□ 3.19
UBXN1-204ENST00000524762 THOC2Q8NI27 1593 aaKnown RBP34.99■■■■□ 3.19
UBXN1-204ENST00000524762 CFTRP13569 1480 aa34.88■■■■□ 3.17
UBXN1-204ENST00000524762 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
UBXN1-204ENST00000524762 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
UBXN1-204ENST00000524762 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
UBXN1-204ENST00000524762 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
UBXN1-204ENST00000524762 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
UBXN1-204ENST00000524762 WDR62O43379 1518 aa34.64■■■■□ 3.14
UBXN1-204ENST00000524762 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
UBXN1-204ENST00000524762 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
UBXN1-204ENST00000524762 DNAJC5Q9H3Z4 198 aa34.32■■■■□ 3.08
UBXN1-204ENST00000524762 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
UBXN1-204ENST00000524762 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
UBXN1-204ENST00000524762 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
UBXN1-204ENST00000524762 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
UBXN1-204ENST00000524762 ZNF608Q9ULD9 1512 aaPredicted RBP33.85■■■■□ 3.01
UBXN1-204ENST00000524762 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
UBXN1-204ENST00000524762 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
UBXN1-204ENST00000524762 CUX1P39880 1505 aa33.84■■■■□ 3.01
UBXN1-204ENST00000524762 EIF4G3O43432 1585 aaKnown RBP33.76■■■□□ 2.99
UBXN1-204ENST00000524762 FGD5Q6ZNL6 1462 aa33.73■■■□□ 2.99
UBXN1-204ENST00000524762 RAD54L2Q9Y4B4 1467 aa33.69■■■□□ 2.98
UBXN1-204ENST00000524762 SOGA1O94964 1423 aa33.65■■■□□ 2.98
UBXN1-204ENST00000524762 AQRO60306 1485 aaKnown RBP eCLIP33.6■■■□□ 2.978e-8■■■■□ 24
UBXN1-204ENST00000524762 WDR97A6NE52 1622 aa33.57■■■□□ 2.96
UBXN1-204ENST00000524762 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
UBXN1-204ENST00000524762 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
UBXN1-204ENST00000524762 WRNQ14191 1432 aaPredicted RBP eCLIP33.48■■■□□ 2.95
UBXN1-204ENST00000524762 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
UBXN1-204ENST00000524762 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
UBXN1-204ENST00000524762 OSCARQ8IYS5 282 aa33.45■■■□□ 2.95
UBXN1-204ENST00000524762 ABCA10Q8WWZ4 1543 aa33.4■■■□□ 2.94
UBXN1-204ENST00000524762 CHD1O14646 1710 aa33.38■■■□□ 2.93
UBXN1-204ENST00000524762 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
UBXN1-204ENST00000524762 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
UBXN1-204ENST00000524762 PBRM1Q86U86 1689 aa33.32■■■□□ 2.92
UBXN1-204ENST00000524762 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
UBXN1-204ENST00000524762 GAPVD1Q14C86 1478 aa33.28■■■□□ 2.92
UBXN1-204ENST00000524762 MAGI1Q96QZ7 1491 aaPredicted RBP33.27■■■□□ 2.92
UBXN1-204ENST00000524762 SYNJ2O15056 1496 aa33.14■■■□□ 2.9
UBXN1-204ENST00000524762 FBLN2P98095 1184 aa33.14■■■□□ 2.9
UBXN1-204ENST00000524762 RIMBP3CA6NJZ7 1639 aa33.07■■■□□ 2.88
UBXN1-204ENST00000524762 RIMBP3BA6NNM3 1639 aa33.07■■■□□ 2.88
UBXN1-204ENST00000524762 RIMBP3Q9UFD9 1639 aa33.07■■■□□ 2.88
UBXN1-204ENST00000524762 CHMP7Q8WUX9 453 aaPredicted RBP33.04■■■□□ 2.88
UBXN1-204ENST00000524762 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
UBXN1-204ENST00000524762 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
UBXN1-204ENST00000524762 CLASP1Q7Z460 1538 aa33.02■■■□□ 2.88
UBXN1-204ENST00000524762 ERICH3Q5RHP9 1530 aa33.01■■■□□ 2.87
UBXN1-204ENST00000524762 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
UBXN1-204ENST00000524762 TRIM41Q8WV44 630 aa32.9■■■□□ 2.86
UBXN1-204ENST00000524762 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
UBXN1-204ENST00000524762 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
UBXN1-204ENST00000524762 NUP160Q12769 1436 aa32.78■■■□□ 2.84
UBXN1-204ENST00000524762 KIF27Q86VH2 1401 aa32.77■■■□□ 2.84
UBXN1-204ENST00000524762 ARAP1Q96P48 1450 aa32.75■■■□□ 2.83
UBXN1-204ENST00000524762 CUL7Q14999 1698 aa32.68■■■□□ 2.82
UBXN1-204ENST00000524762 IGF1RP08069 1367 aa32.68■■■□□ 2.82
UBXN1-204ENST00000524762 CYB5RLQ6IPT4 315 aa32.61■■■□□ 2.81
UBXN1-204ENST00000524762 SHROOM2Q13796 1616 aa32.61■■■□□ 2.81
UBXN1-204ENST00000524762 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
UBXN1-204ENST00000524762 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
UBXN1-204ENST00000524762 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms