RNA–Protein interactions for RNA: ENST00000524651.5

LMO7-214, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-214ENST00000524651 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
LMO7-214ENST00000524651 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
LMO7-214ENST00000524651 ABCC9O60706 1549 aa29.34■■■□□ 2.29
LMO7-214ENST00000524651 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
LMO7-214ENST00000524651 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
LMO7-214ENST00000524651 NACADO15069 1562 aa28.07■■■□□ 2.08
LMO7-214ENST00000524651 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
LMO7-214ENST00000524651 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
LMO7-214ENST00000524651 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
LMO7-214ENST00000524651 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
LMO7-214ENST00000524651 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
LMO7-214ENST00000524651 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
LMO7-214ENST00000524651 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
LMO7-214ENST00000524651 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
LMO7-214ENST00000524651 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
LMO7-214ENST00000524651 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
LMO7-214ENST00000524651 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
LMO7-214ENST00000524651 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
LMO7-214ENST00000524651 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
LMO7-214ENST00000524651 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
LMO7-214ENST00000524651 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
LMO7-214ENST00000524651 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
LMO7-214ENST00000524651 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
LMO7-214ENST00000524651 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
LMO7-214ENST00000524651 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
LMO7-214ENST00000524651 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
LMO7-214ENST00000524651 BAZ1BQ9UIG0 1483 aaKnown RBP25.7■■□□□ 1.7
LMO7-214ENST00000524651 WIZO95785 1651 aa25.57■■□□□ 1.68
LMO7-214ENST00000524651 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
LMO7-214ENST00000524651 NESP48681 1621 aa25.38■■□□□ 1.65
LMO7-214ENST00000524651 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
LMO7-214ENST00000524651 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
LMO7-214ENST00000524651 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
LMO7-214ENST00000524651 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
LMO7-214ENST00000524651 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
LMO7-214ENST00000524651 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
LMO7-214ENST00000524651 CUX2O14529 1486 aa25.02■■□□□ 1.6
LMO7-214ENST00000524651 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
LMO7-214ENST00000524651 CFTRP13569 1480 aa25.01■■□□□ 1.59
LMO7-214ENST00000524651 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
LMO7-214ENST00000524651 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
LMO7-214ENST00000524651 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
LMO7-214ENST00000524651 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
LMO7-214ENST00000524651 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
LMO7-214ENST00000524651 WDR62O43379 1518 aa24.76■■□□□ 1.55
LMO7-214ENST00000524651 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
LMO7-214ENST00000524651 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
LMO7-214ENST00000524651 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
LMO7-214ENST00000524651 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
LMO7-214ENST00000524651 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
LMO7-214ENST00000524651 DNAJC5Q9H3Z4 198 aa24.4■■□□□ 1.5
LMO7-214ENST00000524651 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
LMO7-214ENST00000524651 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
LMO7-214ENST00000524651 CUX1P39880 1505 aa24.28■■□□□ 1.48
LMO7-214ENST00000524651 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
LMO7-214ENST00000524651 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
LMO7-214ENST00000524651 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
LMO7-214ENST00000524651 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
LMO7-214ENST00000524651 SOGA1O94964 1423 aa24.16■■□□□ 1.46
LMO7-214ENST00000524651 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
LMO7-214ENST00000524651 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
LMO7-214ENST00000524651 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
LMO7-214ENST00000524651 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
LMO7-214ENST00000524651 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
LMO7-214ENST00000524651 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
LMO7-214ENST00000524651 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
LMO7-214ENST00000524651 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
LMO7-214ENST00000524651 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
LMO7-214ENST00000524651 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
LMO7-214ENST00000524651 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
LMO7-214ENST00000524651 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
LMO7-214ENST00000524651 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
LMO7-214ENST00000524651 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
LMO7-214ENST00000524651 FBLN2P98095 1184 aa23.82■■□□□ 1.4
LMO7-214ENST00000524651 CHD1O14646 1710 aa23.81■■□□□ 1.4
LMO7-214ENST00000524651 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
LMO7-214ENST00000524651 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
LMO7-214ENST00000524651 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
LMO7-214ENST00000524651 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
LMO7-214ENST00000524651 ADAMTS12P58397 1594 aa23.64■■□□□ 1.37
LMO7-214ENST00000524651 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
LMO7-214ENST00000524651 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
LMO7-214ENST00000524651 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
LMO7-214ENST00000524651 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
LMO7-214ENST00000524651 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
LMO7-214ENST00000524651 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
LMO7-214ENST00000524651 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
LMO7-214ENST00000524651 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
LMO7-214ENST00000524651 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
LMO7-214ENST00000524651 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
LMO7-214ENST00000524651 IGF1RP08069 1367 aa23.52■■□□□ 1.36
LMO7-214ENST00000524651 NUP160Q12769 1436 aa23.5■■□□□ 1.35
LMO7-214ENST00000524651 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
LMO7-214ENST00000524651 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
LMO7-214ENST00000524651 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
LMO7-214ENST00000524651 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
LMO7-214ENST00000524651 CUL7Q14999 1698 aa23.38■■□□□ 1.33
LMO7-214ENST00000524651 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
LMO7-214ENST00000524651 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
LMO7-214ENST00000524651 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms