RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
SF3B2-203ENST00000524627 ABCC9O60706 1549 aa29.19■■■□□ 2.26
SF3B2-203ENST00000524627 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.23
SF3B2-203ENST00000524627 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
SF3B2-203ENST00000524627 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
SF3B2-203ENST00000524627 NACADO15069 1562 aa27.42■■□□□ 1.98
SF3B2-203ENST00000524627 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
SF3B2-203ENST00000524627 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
SF3B2-203ENST00000524627 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
SF3B2-203ENST00000524627 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.91
SF3B2-203ENST00000524627 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
SF3B2-203ENST00000524627 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
SF3B2-203ENST00000524627 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
SF3B2-203ENST00000524627 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
SF3B2-203ENST00000524627 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
SF3B2-203ENST00000524627 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
SF3B2-203ENST00000524627 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
SF3B2-203ENST00000524627 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
SF3B2-203ENST00000524627 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
SF3B2-203ENST00000524627 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
SF3B2-203ENST00000524627 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
SF3B2-203ENST00000524627 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
SF3B2-203ENST00000524627 CUX2O14529 1486 aa25.19■■□□□ 1.62
SF3B2-203ENST00000524627 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
SF3B2-203ENST00000524627 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
SF3B2-203ENST00000524627 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
SF3B2-203ENST00000524627 NESP48681 1621 aa25.01■■□□□ 1.59
SF3B2-203ENST00000524627 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
SF3B2-203ENST00000524627 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
SF3B2-203ENST00000524627 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
SF3B2-203ENST00000524627 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
SF3B2-203ENST00000524627 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
SF3B2-203ENST00000524627 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
SF3B2-203ENST00000524627 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
SF3B2-203ENST00000524627 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
SF3B2-203ENST00000524627 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
SF3B2-203ENST00000524627 WIZO95785 1651 aa24.53■■□□□ 1.52
SF3B2-203ENST00000524627 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
SF3B2-203ENST00000524627 WDR62O43379 1518 aa24.4■■□□□ 1.5
SF3B2-203ENST00000524627 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
SF3B2-203ENST00000524627 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
SF3B2-203ENST00000524627 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
SF3B2-203ENST00000524627 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
SF3B2-203ENST00000524627 CFTRP13569 1480 aa24.23■■□□□ 1.47
SF3B2-203ENST00000524627 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
SF3B2-203ENST00000524627 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
SF3B2-203ENST00000524627 OSCARQ8IYS5 282 aa24.02■■□□□ 1.44
SF3B2-203ENST00000524627 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
SF3B2-203ENST00000524627 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
SF3B2-203ENST00000524627 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
SF3B2-203ENST00000524627 IFT140Q96RY7 1462 aa23.84■■□□□ 1.41
SF3B2-203ENST00000524627 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
SF3B2-203ENST00000524627 RIMBP3CA6NJZ7 1639 aa23.74■■□□□ 1.39
SF3B2-203ENST00000524627 RIMBP3BA6NNM3 1639 aa23.74■■□□□ 1.39
SF3B2-203ENST00000524627 RIMBP3Q9UFD9 1639 aa23.74■■□□□ 1.39
SF3B2-203ENST00000524627 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
SF3B2-203ENST00000524627 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
SF3B2-203ENST00000524627 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
SF3B2-203ENST00000524627 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
SF3B2-203ENST00000524627 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.374e-7■■■■□ 20.8
SF3B2-203ENST00000524627 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
SF3B2-203ENST00000524627 CHD1O14646 1710 aa23.56■■□□□ 1.36
SF3B2-203ENST00000524627 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
SF3B2-203ENST00000524627 FBLN2P98095 1184 aa23.51■■□□□ 1.35
SF3B2-203ENST00000524627 CYB5RLQ6IPT4 315 aa23.5■■□□□ 1.35
SF3B2-203ENST00000524627 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
SF3B2-203ENST00000524627 SOGA1O94964 1423 aa23.44■■□□□ 1.34
SF3B2-203ENST00000524627 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
SF3B2-203ENST00000524627 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
SF3B2-203ENST00000524627 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
SF3B2-203ENST00000524627 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
SF3B2-203ENST00000524627 CUX1P39880 1505 aa23.33■■□□□ 1.33
SF3B2-203ENST00000524627 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
SF3B2-203ENST00000524627 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
SF3B2-203ENST00000524627 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
SF3B2-203ENST00000524627 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
SF3B2-203ENST00000524627 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
SF3B2-203ENST00000524627 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
SF3B2-203ENST00000524627 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
SF3B2-203ENST00000524627 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
SF3B2-203ENST00000524627 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
SF3B2-203ENST00000524627 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
SF3B2-203ENST00000524627 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
SF3B2-203ENST00000524627 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
SF3B2-203ENST00000524627 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
SF3B2-203ENST00000524627 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
SF3B2-203ENST00000524627 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
SF3B2-203ENST00000524627 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
SF3B2-203ENST00000524627 ERCC6L2Q5T890 1561 aa22.92■■□□□ 1.26
SF3B2-203ENST00000524627 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
SF3B2-203ENST00000524627 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
SF3B2-203ENST00000524627 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
SF3B2-203ENST00000524627 NUP160Q12769 1436 aa22.88■■□□□ 1.25
SF3B2-203ENST00000524627 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
SF3B2-203ENST00000524627 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
SF3B2-203ENST00000524627 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
SF3B2-203ENST00000524627 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
SF3B2-203ENST00000524627 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
SF3B2-203ENST00000524627 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
SF3B2-203ENST00000524627 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms