RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 NISCHQ9Y2I1 1504 aa46.33■■■■■ 5.01
CTSB-206ENST00000524500 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
CTSB-206ENST00000524500 ABCC9O60706 1549 aa40.92■■■■■ 4.14
CTSB-206ENST00000524500 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
CTSB-206ENST00000524500 NACADO15069 1562 aa39.03■■■■□ 3.84
CTSB-206ENST00000524500 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
CTSB-206ENST00000524500 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
CTSB-206ENST00000524500 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
CTSB-206ENST00000524500 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
CTSB-206ENST00000524500 PABPN1Q86U42 306 aaKnown RBP eCLIP38.19■■■■□ 3.7
CTSB-206ENST00000524500 UNC13AQ9UPW8 1703 aa38.16■■■■□ 3.7
CTSB-206ENST00000524500 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
CTSB-206ENST00000524500 DNAJC5BQ9UF47 199 aa37.92■■■■□ 3.66
CTSB-206ENST00000524500 SCRIBQ14160 1630 aa37.71■■■■□ 3.63
CTSB-206ENST00000524500 SHROOM4Q9ULL8 1493 aa37.58■■■■□ 3.61
CTSB-206ENST00000524500 EIF4G1Q04637 1599 aaKnown RBP37.01■■■■□ 3.52
CTSB-206ENST00000524500 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
CTSB-206ENST00000524500 CECR2Q9BXF3 1484 aa36.83■■■■□ 3.49
CTSB-206ENST00000524500 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
CTSB-206ENST00000524500 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
CTSB-206ENST00000524500 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
CTSB-206ENST00000524500 BAZ1AQ9NRL2 1556 aaPredicted RBP35.96■■■■□ 3.35
CTSB-206ENST00000524500 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
CTSB-206ENST00000524500 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
CTSB-206ENST00000524500 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
CTSB-206ENST00000524500 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
CTSB-206ENST00000524500 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
CTSB-206ENST00000524500 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
CTSB-206ENST00000524500 WIZO95785 1651 aa35.26■■■■□ 3.23
CTSB-206ENST00000524500 NESP48681 1621 aa35.25■■■■□ 3.23
CTSB-206ENST00000524500 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
CTSB-206ENST00000524500 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
CTSB-206ENST00000524500 CUX2O14529 1486 aa35.1■■■■□ 3.21
CTSB-206ENST00000524500 CADPSQ9ULU8 1353 aa34.98■■■■□ 3.19
CTSB-206ENST00000524500 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
CTSB-206ENST00000524500 TOP2AP11388 1531 aaKnown RBP34.9■■■■□ 3.18
CTSB-206ENST00000524500 THOC2Q8NI27 1593 aaKnown RBP34.79■■■■□ 3.16
CTSB-206ENST00000524500 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
CTSB-206ENST00000524500 CFTRP13569 1480 aa34.65■■■■□ 3.14
CTSB-206ENST00000524500 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
CTSB-206ENST00000524500 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
CTSB-206ENST00000524500 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
CTSB-206ENST00000524500 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
CTSB-206ENST00000524500 CCDC88BA6NC98 1476 aa34.5■■■■□ 3.11
CTSB-206ENST00000524500 WDR62O43379 1518 aa34.46■■■■□ 3.11
CTSB-206ENST00000524500 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
CTSB-206ENST00000524500 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
CTSB-206ENST00000524500 SUPT5HO00267 1087 aaKnown RBP34.02■■■■□ 3.04
CTSB-206ENST00000524500 ABCC8Q09428 1581 aa33.97■■■■□ 3.03
CTSB-206ENST00000524500 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
CTSB-206ENST00000524500 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
CTSB-206ENST00000524500 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
CTSB-206ENST00000524500 ZNF608Q9ULD9 1512 aaPredicted RBP33.7■■■□□ 2.99
CTSB-206ENST00000524500 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
CTSB-206ENST00000524500 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
CTSB-206ENST00000524500 TARBP1Q13395 1621 aaKnown RBP33.56■■■□□ 2.96
CTSB-206ENST00000524500 EIF4G3O43432 1585 aaKnown RBP33.54■■■□□ 2.96
CTSB-206ENST00000524500 SOGA1O94964 1423 aa33.53■■■□□ 2.96
CTSB-206ENST00000524500 CUX1P39880 1505 aa33.51■■■□□ 2.95
CTSB-206ENST00000524500 AQRO60306 1485 aaKnown RBP eCLIP33.49■■■□□ 2.952e-8■■■■■ 40.1
CTSB-206ENST00000524500 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
CTSB-206ENST00000524500 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
CTSB-206ENST00000524500 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
CTSB-206ENST00000524500 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
CTSB-206ENST00000524500 TRIM41Q8WV44 630 aa33.26■■■□□ 2.91
CTSB-206ENST00000524500 FBLN2P98095 1184 aa33.25■■■□□ 2.91
CTSB-206ENST00000524500 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
CTSB-206ENST00000524500 GRIN2BQ13224 1484 aa33.17■■■□□ 2.9
CTSB-206ENST00000524500 SNAPC4Q5SXM2 1469 aa33.17■■■□□ 2.9
CTSB-206ENST00000524500 CHD1O14646 1710 aa33.16■■■□□ 2.9
CTSB-206ENST00000524500 ABCA10Q8WWZ4 1543 aa33.14■■■□□ 2.9
CTSB-206ENST00000524500 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
CTSB-206ENST00000524500 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
CTSB-206ENST00000524500 TOP2BQ02880 1626 aa33.1■■■□□ 2.89
CTSB-206ENST00000524500 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
CTSB-206ENST00000524500 BIVM-ERCC5R4GMW8 1640 aa33.09■■■□□ 2.89
CTSB-206ENST00000524500 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
CTSB-206ENST00000524500 RIMBP3CA6NJZ7 1639 aa33.03■■■□□ 2.88
CTSB-206ENST00000524500 RIMBP3BA6NNM3 1639 aa33.03■■■□□ 2.88
CTSB-206ENST00000524500 RIMBP3Q9UFD9 1639 aa33.03■■■□□ 2.88
CTSB-206ENST00000524500 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
CTSB-206ENST00000524500 ABCA5Q8WWZ7 1642 aa33■■■□□ 2.87
CTSB-206ENST00000524500 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
CTSB-206ENST00000524500 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
CTSB-206ENST00000524500 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.85
CTSB-206ENST00000524500 CYB5RLQ6IPT4 315 aa32.8■■■□□ 2.84
CTSB-206ENST00000524500 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
CTSB-206ENST00000524500 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
CTSB-206ENST00000524500 GRIN2AQ12879 1464 aa32.73■■■□□ 2.83
CTSB-206ENST00000524500 FHAD1B1AJZ9 1412 aa32.72■■■□□ 2.83
CTSB-206ENST00000524500 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
CTSB-206ENST00000524500 NUP160Q12769 1436 aa32.59■■■□□ 2.81
CTSB-206ENST00000524500 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
CTSB-206ENST00000524500 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
CTSB-206ENST00000524500 IGF1RP08069 1367 aa32.45■■■□□ 2.78
CTSB-206ENST00000524500 CUL7Q14999 1698 aa32.34■■■□□ 2.77
CTSB-206ENST00000524500 SHROOM2Q13796 1616 aa32.34■■■□□ 2.77
CTSB-206ENST00000524500 JPH4Q96JJ6 628 aa32.32■■■□□ 2.76
CTSB-206ENST00000524500 ERCC6L2Q5T890 1561 aa32.32■■■□□ 2.76
CTSB-206ENST00000524500 TRHP20396 242 aaPredicted RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms