RNA–Protein interactions for RNA: ENST00000524283.5

LINC01608-202, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-202ENST00000524283 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
LINC01608-202ENST00000524283 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
LINC01608-202ENST00000524283 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
LINC01608-202ENST00000524283 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
LINC01608-202ENST00000524283 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
LINC01608-202ENST00000524283 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
LINC01608-202ENST00000524283 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
LINC01608-202ENST00000524283 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
LINC01608-202ENST00000524283 ABCC9O60706 1549 aa14.56□□□□□ -0.08
LINC01608-202ENST00000524283 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
LINC01608-202ENST00000524283 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
LINC01608-202ENST00000524283 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
LINC01608-202ENST00000524283 NACADO15069 1562 aa14.35□□□□□ -0.11
LINC01608-202ENST00000524283 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
LINC01608-202ENST00000524283 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
LINC01608-202ENST00000524283 FOXD1Q16676 465 aa14.02□□□□□ -0.17
LINC01608-202ENST00000524283 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
LINC01608-202ENST00000524283 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC01608-202ENST00000524283 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
LINC01608-202ENST00000524283 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
LINC01608-202ENST00000524283 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
LINC01608-202ENST00000524283 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
LINC01608-202ENST00000524283 ADRA2BP18089 450 aa13.54□□□□□ -0.24
LINC01608-202ENST00000524283 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
LINC01608-202ENST00000524283 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
LINC01608-202ENST00000524283 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
LINC01608-202ENST00000524283 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
LINC01608-202ENST00000524283 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
LINC01608-202ENST00000524283 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
LINC01608-202ENST00000524283 KCNA4P22459 653 aa13.39□□□□□ -0.27
LINC01608-202ENST00000524283 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
LINC01608-202ENST00000524283 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
LINC01608-202ENST00000524283 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
LINC01608-202ENST00000524283 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
LINC01608-202ENST00000524283 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
LINC01608-202ENST00000524283 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
LINC01608-202ENST00000524283 WIZO95785 1651 aa13.28□□□□□ -0.28
LINC01608-202ENST00000524283 BAZ1BQ9UIG0 1483 aaKnown RBP13.24□□□□□ -0.29
LINC01608-202ENST00000524283 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
LINC01608-202ENST00000524283 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
LINC01608-202ENST00000524283 HMGXB3Q12766 1538 aa13.19□□□□□ -0.3
LINC01608-202ENST00000524283 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
LINC01608-202ENST00000524283 MSH5O43196 834 aa13.15□□□□□ -0.3
LINC01608-202ENST00000524283 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
LINC01608-202ENST00000524283 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
LINC01608-202ENST00000524283 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
LINC01608-202ENST00000524283 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
LINC01608-202ENST00000524283 CFTRP13569 1480 aa12.88□□□□□ -0.35
LINC01608-202ENST00000524283 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
LINC01608-202ENST00000524283 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
LINC01608-202ENST00000524283 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LINC01608-202ENST00000524283 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
LINC01608-202ENST00000524283 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
LINC01608-202ENST00000524283 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
LINC01608-202ENST00000524283 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
LINC01608-202ENST00000524283 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
LINC01608-202ENST00000524283 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
LINC01608-202ENST00000524283 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
LINC01608-202ENST00000524283 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
LINC01608-202ENST00000524283 NESP48681 1621 aa12.68□□□□□ -0.38
LINC01608-202ENST00000524283 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
LINC01608-202ENST00000524283 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
LINC01608-202ENST00000524283 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
LINC01608-202ENST00000524283 EEA1Q15075 1411 aa12.6□□□□□ -0.39
LINC01608-202ENST00000524283 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
LINC01608-202ENST00000524283 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
LINC01608-202ENST00000524283 CUX1P39880 1505 aa12.57□□□□□ -0.4
LINC01608-202ENST00000524283 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
LINC01608-202ENST00000524283 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
LINC01608-202ENST00000524283 TOPBP1Q92547 1522 aa12.53□□□□□ -0.4
LINC01608-202ENST00000524283 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
LINC01608-202ENST00000524283 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
LINC01608-202ENST00000524283 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
LINC01608-202ENST00000524283 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
LINC01608-202ENST00000524283 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
LINC01608-202ENST00000524283 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
LINC01608-202ENST00000524283 SOGA1O94964 1423 aa12.49□□□□□ -0.41
LINC01608-202ENST00000524283 WDR62O43379 1518 aa12.46□□□□□ -0.42
LINC01608-202ENST00000524283 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
LINC01608-202ENST00000524283 CUX2O14529 1486 aa12.43□□□□□ -0.42
LINC01608-202ENST00000524283 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
LINC01608-202ENST00000524283 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
LINC01608-202ENST00000524283 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
LINC01608-202ENST00000524283 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
LINC01608-202ENST00000524283 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
LINC01608-202ENST00000524283 ZBTB22O15209 634 aa12.35□□□□□ -0.43
LINC01608-202ENST00000524283 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
LINC01608-202ENST00000524283 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
LINC01608-202ENST00000524283 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
LINC01608-202ENST00000524283 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
LINC01608-202ENST00000524283 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
LINC01608-202ENST00000524283 IGF1RP08069 1367 aa12.32□□□□□ -0.44
LINC01608-202ENST00000524283 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
LINC01608-202ENST00000524283 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
LINC01608-202ENST00000524283 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
LINC01608-202ENST00000524283 CARMIL1Q5VZK9 1371 aa12.3□□□□□ -0.44
LINC01608-202ENST00000524283 KIF21BO75037 1637 aa12.3□□□□□ -0.44
LINC01608-202ENST00000524283 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
LINC01608-202ENST00000524283 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
LINC01608-202ENST00000524283 TNIKQ9UKE5 1360 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms