RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
FBXO28-205ENST00000523990 CCDC180Q9P1Z9 1646 aa42.21■■■■■ 4.35
FBXO28-205ENST00000523990 ABCC9O60706 1549 aa41.38■■■■■ 4.22
FBXO28-205ENST00000523990 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
FBXO28-205ENST00000523990 NACADO15069 1562 aa39.65■■■■□ 3.94
FBXO28-205ENST00000523990 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
FBXO28-205ENST00000523990 DCAF8L2P0C7V8 631 aa39.33■■■■□ 3.89
FBXO28-205ENST00000523990 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
FBXO28-205ENST00000523990 DCAF1Q9Y4B6 1507 aa39.07■■■■□ 3.85
FBXO28-205ENST00000523990 UNC13AQ9UPW8 1703 aa39.02■■■■□ 3.84
FBXO28-205ENST00000523990 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
FBXO28-205ENST00000523990 PABPN1Q86U42 306 aaKnown RBP eCLIP38.54■■■■□ 3.76
FBXO28-205ENST00000523990 SCRIBQ14160 1630 aa38.42■■■■□ 3.74
FBXO28-205ENST00000523990 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
FBXO28-205ENST00000523990 DNAJC5BQ9UF47 199 aa38.15■■■■□ 3.7
FBXO28-205ENST00000523990 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
FBXO28-205ENST00000523990 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
FBXO28-205ENST00000523990 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
FBXO28-205ENST00000523990 SMARCA4P51532 1647 aa36.74■■■■□ 3.47
FBXO28-205ENST00000523990 BAZ1AQ9NRL2 1556 aaPredicted RBP36.62■■■■□ 3.45
FBXO28-205ENST00000523990 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
FBXO28-205ENST00000523990 ATAD2BQ9ULI0 1458 aa36.53■■■■□ 3.44
FBXO28-205ENST00000523990 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
FBXO28-205ENST00000523990 HMGXB3Q12766 1538 aa36.42■■■■□ 3.42
FBXO28-205ENST00000523990 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
FBXO28-205ENST00000523990 MROH2BQ7Z745 1585 aa36.37■■■■□ 3.41
FBXO28-205ENST00000523990 BAZ1BQ9UIG0 1483 aaKnown RBP36.22■■■■□ 3.39
FBXO28-205ENST00000523990 WIZO95785 1651 aa36.03■■■■□ 3.36
FBXO28-205ENST00000523990 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.32
FBXO28-205ENST00000523990 NESP48681 1621 aa35.77■■■■□ 3.32
FBXO28-205ENST00000523990 LAMC3Q9Y6N6 1575 aa35.69■■■■□ 3.3
FBXO28-205ENST00000523990 ERCC6Q03468 1493 aa35.68■■■■□ 3.3
FBXO28-205ENST00000523990 TOP2AP11388 1531 aaKnown RBP35.6■■■■□ 3.29
FBXO28-205ENST00000523990 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
FBXO28-205ENST00000523990 CUX2O14529 1486 aa35.45■■■■□ 3.26
FBXO28-205ENST00000523990 CADPSQ9ULU8 1353 aa35.42■■■■□ 3.26
FBXO28-205ENST00000523990 THOC2Q8NI27 1593 aaKnown RBP35.39■■■■□ 3.26
FBXO28-205ENST00000523990 PDS5BQ9NTI5 1447 aa35.36■■■■□ 3.25
FBXO28-205ENST00000523990 CFTRP13569 1480 aa35.21■■■■□ 3.23
FBXO28-205ENST00000523990 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
FBXO28-205ENST00000523990 CCDC88BA6NC98 1476 aa35.12■■■■□ 3.21
FBXO28-205ENST00000523990 FANCD2Q9BXW9 1451 aa35.06■■■■□ 3.2
FBXO28-205ENST00000523990 MRC2Q9UBG0 1479 aa35.06■■■■□ 3.2
FBXO28-205ENST00000523990 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
FBXO28-205ENST00000523990 WDR62O43379 1518 aa35.01■■■■□ 3.19
FBXO28-205ENST00000523990 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
FBXO28-205ENST00000523990 SUPT5HO00267 1087 aaKnown RBP34.59■■■■□ 3.13
FBXO28-205ENST00000523990 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
FBXO28-205ENST00000523990 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
FBXO28-205ENST00000523990 DNMBPQ6XZF7 1577 aa34.47■■■■□ 3.11
FBXO28-205ENST00000523990 ABCC8Q09428 1581 aa34.44■■■■□ 3.1
FBXO28-205ENST00000523990 IFT140Q96RY7 1462 aa34.31■■■■□ 3.08
FBXO28-205ENST00000523990 TARBP1Q13395 1621 aaKnown RBP34.2■■■■□ 3.07
FBXO28-205ENST00000523990 ZNF608Q9ULD9 1512 aaPredicted RBP34.19■■■■□ 3.06
FBXO28-205ENST00000523990 POLA1P09884 1462 aaPredicted RBP34.19■■■■□ 3.06
FBXO28-205ENST00000523990 CUX1P39880 1505 aa34.16■■■■□ 3.06
FBXO28-205ENST00000523990 EIF4G3O43432 1585 aaKnown RBP34.14■■■■□ 3.06
FBXO28-205ENST00000523990 FGD5Q6ZNL6 1462 aa34.06■■■■□ 3.04
FBXO28-205ENST00000523990 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.03
FBXO28-205ENST00000523990 SOGA1O94964 1423 aa33.96■■■■□ 3.03
FBXO28-205ENST00000523990 WDR97A6NE52 1622 aa33.94■■■■□ 3.02
FBXO28-205ENST00000523990 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.021e-6■□□□□ 8.5
FBXO28-205ENST00000523990 BIVM-ERCC5R4GMW8 1640 aa33.87■■■■□ 3.01
FBXO28-205ENST00000523990 TOP2BQ02880 1626 aa33.82■■■■□ 3.01
FBXO28-205ENST00000523990 SYNJ1O43426 1573 aa33.8■■■■□ 3
FBXO28-205ENST00000523990 CHD1O14646 1710 aa33.8■■■■□ 3
FBXO28-205ENST00000523990 OSCARQ8IYS5 282 aa33.79■■■■□ 3
FBXO28-205ENST00000523990 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
FBXO28-205ENST00000523990 WRNQ14191 1432 aaPredicted RBP eCLIP33.78■■■■□ 3
FBXO28-205ENST00000523990 ABCA10Q8WWZ4 1543 aa33.72■■■□□ 2.99
FBXO28-205ENST00000523990 PBRM1Q86U86 1689 aa33.72■■■□□ 2.99
FBXO28-205ENST00000523990 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
FBXO28-205ENST00000523990 SNAPC4Q5SXM2 1469 aa33.66■■■□□ 2.98
FBXO28-205ENST00000523990 GRIN2BQ13224 1484 aa33.64■■■□□ 2.98
FBXO28-205ENST00000523990 GAPVD1Q14C86 1478 aa33.61■■■□□ 2.97
FBXO28-205ENST00000523990 MAGI1Q96QZ7 1491 aaPredicted RBP33.6■■■□□ 2.97
FBXO28-205ENST00000523990 FBLN2P98095 1184 aa33.48■■■□□ 2.95
FBXO28-205ENST00000523990 SYNJ2O15056 1496 aa33.47■■■□□ 2.95
FBXO28-205ENST00000523990 RIMBP3CA6NJZ7 1639 aa33.47■■■□□ 2.95
FBXO28-205ENST00000523990 RIMBP3BA6NNM3 1639 aa33.47■■■□□ 2.95
FBXO28-205ENST00000523990 RIMBP3Q9UFD9 1639 aa33.47■■■□□ 2.95
FBXO28-205ENST00000523990 ARHGEF11O15085 1522 aa33.39■■■□□ 2.94
FBXO28-205ENST00000523990 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
FBXO28-205ENST00000523990 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
FBXO28-205ENST00000523990 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
FBXO28-205ENST00000523990 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
FBXO28-205ENST00000523990 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
FBXO28-205ENST00000523990 GRIN2AQ12879 1464 aa33.24■■■□□ 2.91
FBXO28-205ENST00000523990 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
FBXO28-205ENST00000523990 CEP170Q5SW79 1584 aa33.13■■■□□ 2.89
FBXO28-205ENST00000523990 ARAP1Q96P48 1450 aa33.11■■■□□ 2.89
FBXO28-205ENST00000523990 NUP160Q12769 1436 aa33.09■■■□□ 2.89
FBXO28-205ENST00000523990 KIF27Q86VH2 1401 aa33.08■■■□□ 2.89
FBXO28-205ENST00000523990 CUL7Q14999 1698 aa33.03■■■□□ 2.88
FBXO28-205ENST00000523990 SHROOM2Q13796 1616 aa32.96■■■□□ 2.87
FBXO28-205ENST00000523990 CYB5RLQ6IPT4 315 aa32.95■■■□□ 2.87
FBXO28-205ENST00000523990 IGF1RP08069 1367 aa32.95■■■□□ 2.86
FBXO28-205ENST00000523990 RUSC2Q8N2Y8 1516 aa32.91■■■□□ 2.86
FBXO28-205ENST00000523990 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
FBXO28-205ENST00000523990 CARMIL1Q5VZK9 1371 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms