RNA–Protein interactions for RNA: ENST00000523906.1

GPAT4-211, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 5

Gene GPAT4, Length 664 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-211ENST00000523906 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.98
GPAT4-211ENST00000523906 ABCC9O60706 1549 aa25.12■■□□□ 1.61
GPAT4-211ENST00000523906 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
GPAT4-211ENST00000523906 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
GPAT4-211ENST00000523906 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
GPAT4-211ENST00000523906 NACADO15069 1562 aa23.54■■□□□ 1.36
GPAT4-211ENST00000523906 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
GPAT4-211ENST00000523906 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
GPAT4-211ENST00000523906 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
GPAT4-211ENST00000523906 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
GPAT4-211ENST00000523906 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
GPAT4-211ENST00000523906 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
GPAT4-211ENST00000523906 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
GPAT4-211ENST00000523906 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
GPAT4-211ENST00000523906 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
GPAT4-211ENST00000523906 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
GPAT4-211ENST00000523906 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
GPAT4-211ENST00000523906 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
GPAT4-211ENST00000523906 DNAJC5Q9H3Z4 198 aa22.13■■□□□ 1.13
GPAT4-211ENST00000523906 CUX2O14529 1486 aa21.83■■□□□ 1.08
GPAT4-211ENST00000523906 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
GPAT4-211ENST00000523906 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
GPAT4-211ENST00000523906 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
GPAT4-211ENST00000523906 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
GPAT4-211ENST00000523906 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
GPAT4-211ENST00000523906 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
GPAT4-211ENST00000523906 NESP48681 1621 aa21.46■■□□□ 1.03
GPAT4-211ENST00000523906 BAZ1BQ9UIG0 1483 aaKnown RBP21.4■■□□□ 1.02
GPAT4-211ENST00000523906 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
GPAT4-211ENST00000523906 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
GPAT4-211ENST00000523906 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
GPAT4-211ENST00000523906 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
GPAT4-211ENST00000523906 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
GPAT4-211ENST00000523906 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
GPAT4-211ENST00000523906 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
GPAT4-211ENST00000523906 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
GPAT4-211ENST00000523906 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
GPAT4-211ENST00000523906 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
GPAT4-211ENST00000523906 WDR62O43379 1518 aa20.98■□□□□ 0.95
GPAT4-211ENST00000523906 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
GPAT4-211ENST00000523906 WIZO95785 1651 aa20.88■□□□□ 0.93
GPAT4-211ENST00000523906 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
GPAT4-211ENST00000523906 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
GPAT4-211ENST00000523906 CFTRP13569 1480 aa20.71■□□□□ 0.91
GPAT4-211ENST00000523906 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
GPAT4-211ENST00000523906 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
GPAT4-211ENST00000523906 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
GPAT4-211ENST00000523906 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
GPAT4-211ENST00000523906 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
GPAT4-211ENST00000523906 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
GPAT4-211ENST00000523906 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
GPAT4-211ENST00000523906 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
GPAT4-211ENST00000523906 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
GPAT4-211ENST00000523906 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
GPAT4-211ENST00000523906 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
GPAT4-211ENST00000523906 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
GPAT4-211ENST00000523906 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
GPAT4-211ENST00000523906 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
GPAT4-211ENST00000523906 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
GPAT4-211ENST00000523906 CHD1O14646 1710 aa20.28■□□□□ 0.84
GPAT4-211ENST00000523906 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
GPAT4-211ENST00000523906 TARBP1Q13395 1621 aaKnown RBP20.21■□□□□ 0.83
GPAT4-211ENST00000523906 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
GPAT4-211ENST00000523906 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.839e-14■■■■□ 22.1
GPAT4-211ENST00000523906 FBLN2P98095 1184 aa20.2■□□□□ 0.82
GPAT4-211ENST00000523906 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
GPAT4-211ENST00000523906 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
GPAT4-211ENST00000523906 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
GPAT4-211ENST00000523906 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
GPAT4-211ENST00000523906 SOGA1O94964 1423 aa20.04■□□□□ 0.8
GPAT4-211ENST00000523906 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
GPAT4-211ENST00000523906 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
GPAT4-211ENST00000523906 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
GPAT4-211ENST00000523906 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
GPAT4-211ENST00000523906 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
GPAT4-211ENST00000523906 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
GPAT4-211ENST00000523906 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
GPAT4-211ENST00000523906 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
GPAT4-211ENST00000523906 AEBP2Q6ZN18 517 aaPredicted RBP19.91■□□□□ 0.78
GPAT4-211ENST00000523906 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
GPAT4-211ENST00000523906 CUX1P39880 1505 aa19.89■□□□□ 0.77
GPAT4-211ENST00000523906 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
GPAT4-211ENST00000523906 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
GPAT4-211ENST00000523906 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
GPAT4-211ENST00000523906 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
GPAT4-211ENST00000523906 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
GPAT4-211ENST00000523906 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
GPAT4-211ENST00000523906 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
GPAT4-211ENST00000523906 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
GPAT4-211ENST00000523906 NUP160Q12769 1436 aa19.59■□□□□ 0.73
GPAT4-211ENST00000523906 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
GPAT4-211ENST00000523906 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
GPAT4-211ENST00000523906 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
GPAT4-211ENST00000523906 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
GPAT4-211ENST00000523906 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
GPAT4-211ENST00000523906 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
GPAT4-211ENST00000523906 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
GPAT4-211ENST00000523906 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
GPAT4-211ENST00000523906 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
GPAT4-211ENST00000523906 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms