RNA–Protein interactions for RNA: ENST00000523736.1

SH2D4A-206, Transcript of SH2 domain containing 4A, humanhuman

TSL 4

Gene SH2D4A, Length 567 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-206ENST00000523736 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
SH2D4A-206ENST00000523736 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
SH2D4A-206ENST00000523736 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
SH2D4A-206ENST00000523736 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SH2D4A-206ENST00000523736 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
SH2D4A-206ENST00000523736 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
SH2D4A-206ENST00000523736 ABCC9O60706 1549 aa20.22■□□□□ 0.83
SH2D4A-206ENST00000523736 FOXD1Q16676 465 aa19.91■□□□□ 0.78
SH2D4A-206ENST00000523736 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
SH2D4A-206ENST00000523736 NACADO15069 1562 aa19.27■□□□□ 0.67
SH2D4A-206ENST00000523736 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
SH2D4A-206ENST00000523736 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
SH2D4A-206ENST00000523736 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
SH2D4A-206ENST00000523736 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
SH2D4A-206ENST00000523736 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
SH2D4A-206ENST00000523736 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
SH2D4A-206ENST00000523736 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
SH2D4A-206ENST00000523736 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
SH2D4A-206ENST00000523736 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
SH2D4A-206ENST00000523736 MSH5O43196 834 aa18.7■□□□□ 0.58
SH2D4A-206ENST00000523736 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
SH2D4A-206ENST00000523736 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
SH2D4A-206ENST00000523736 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
SH2D4A-206ENST00000523736 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
SH2D4A-206ENST00000523736 ADRA2BP18089 450 aa18.5■□□□□ 0.55
SH2D4A-206ENST00000523736 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
SH2D4A-206ENST00000523736 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
SH2D4A-206ENST00000523736 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
SH2D4A-206ENST00000523736 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
SH2D4A-206ENST00000523736 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
SH2D4A-206ENST00000523736 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
SH2D4A-206ENST00000523736 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
SH2D4A-206ENST00000523736 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
SH2D4A-206ENST00000523736 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
SH2D4A-206ENST00000523736 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
SH2D4A-206ENST00000523736 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
SH2D4A-206ENST00000523736 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
SH2D4A-206ENST00000523736 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
SH2D4A-206ENST00000523736 CUX2O14529 1486 aa17.45■□□□□ 0.38
SH2D4A-206ENST00000523736 NESP48681 1621 aa17.45■□□□□ 0.38
SH2D4A-206ENST00000523736 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
SH2D4A-206ENST00000523736 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
SH2D4A-206ENST00000523736 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
SH2D4A-206ENST00000523736 WIZO95785 1651 aa17.36■□□□□ 0.37
SH2D4A-206ENST00000523736 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
SH2D4A-206ENST00000523736 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
SH2D4A-206ENST00000523736 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
SH2D4A-206ENST00000523736 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
SH2D4A-206ENST00000523736 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
SH2D4A-206ENST00000523736 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
SH2D4A-206ENST00000523736 WDR62O43379 1518 aa17.12■□□□□ 0.33
SH2D4A-206ENST00000523736 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
SH2D4A-206ENST00000523736 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
SH2D4A-206ENST00000523736 CFTRP13569 1480 aa17.05■□□□□ 0.32
SH2D4A-206ENST00000523736 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
SH2D4A-206ENST00000523736 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
SH2D4A-206ENST00000523736 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
SH2D4A-206ENST00000523736 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
SH2D4A-206ENST00000523736 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
SH2D4A-206ENST00000523736 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
SH2D4A-206ENST00000523736 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
SH2D4A-206ENST00000523736 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
SH2D4A-206ENST00000523736 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
SH2D4A-206ENST00000523736 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
SH2D4A-206ENST00000523736 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
SH2D4A-206ENST00000523736 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
SH2D4A-206ENST00000523736 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
SH2D4A-206ENST00000523736 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
SH2D4A-206ENST00000523736 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
SH2D4A-206ENST00000523736 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
SH2D4A-206ENST00000523736 CHD1O14646 1710 aa16.52■□□□□ 0.24
SH2D4A-206ENST00000523736 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
SH2D4A-206ENST00000523736 CUX1P39880 1505 aa16.5■□□□□ 0.23
SH2D4A-206ENST00000523736 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
SH2D4A-206ENST00000523736 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
SH2D4A-206ENST00000523736 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
SH2D4A-206ENST00000523736 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
SH2D4A-206ENST00000523736 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
SH2D4A-206ENST00000523736 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
SH2D4A-206ENST00000523736 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
SH2D4A-206ENST00000523736 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
SH2D4A-206ENST00000523736 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
SH2D4A-206ENST00000523736 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
SH2D4A-206ENST00000523736 SOGA1O94964 1423 aa16.36■□□□□ 0.21
SH2D4A-206ENST00000523736 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
SH2D4A-206ENST00000523736 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
SH2D4A-206ENST00000523736 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
SH2D4A-206ENST00000523736 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
SH2D4A-206ENST00000523736 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
SH2D4A-206ENST00000523736 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
SH2D4A-206ENST00000523736 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
SH2D4A-206ENST00000523736 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
SH2D4A-206ENST00000523736 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SH2D4A-206ENST00000523736 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
SH2D4A-206ENST00000523736 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
SH2D4A-206ENST00000523736 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
SH2D4A-206ENST00000523736 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
SH2D4A-206ENST00000523736 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
SH2D4A-206ENST00000523736 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
SH2D4A-206ENST00000523736 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms