RNA–Protein interactions for RNA: ENST00000523396.1

CLU-214, Transcript of clusterin, humanhuman

TSL 3

Gene CLU, Length 426 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-214ENST00000523396 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
CLU-214ENST00000523396 CCDC180Q9P1Z9 1646 aa40.53■■■■■ 4.08
CLU-214ENST00000523396 ABCC9O60706 1549 aa39.94■■■■□ 3.98
CLU-214ENST00000523396 RB1CC1Q8TDY2 1594 aa38.27■■■■□ 3.72
CLU-214ENST00000523396 DCAF8L2P0C7V8 631 aa38.22■■■■□ 3.71
CLU-214ENST00000523396 NACADO15069 1562 aa38.13■■■■□ 3.69
CLU-214ENST00000523396 ZCCHC6Q5VYS8 1495 aaKnown RBP37.82■■■■□ 3.64
CLU-214ENST00000523396 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
CLU-214ENST00000523396 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
CLU-214ENST00000523396 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
CLU-214ENST00000523396 PABPN1Q86U42 306 aaKnown RBP eCLIP37.3■■■■□ 3.56
CLU-214ENST00000523396 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
CLU-214ENST00000523396 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
CLU-214ENST00000523396 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
CLU-214ENST00000523396 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
CLU-214ENST00000523396 EIF4G1Q04637 1599 aaKnown RBP36.17■■■■□ 3.38
CLU-214ENST00000523396 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
CLU-214ENST00000523396 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
CLU-214ENST00000523396 SMARCA4P51532 1647 aa35.36■■■■□ 3.25
CLU-214ENST00000523396 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.24
CLU-214ENST00000523396 ATAD2BQ9ULI0 1458 aa35.19■■■■□ 3.22
CLU-214ENST00000523396 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
CLU-214ENST00000523396 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
CLU-214ENST00000523396 MROH2BQ7Z745 1585 aa35.08■■■■□ 3.21
CLU-214ENST00000523396 HMGXB3Q12766 1538 aa35■■■■□ 3.19
CLU-214ENST00000523396 PEG3Q9GZU2 1588 aa34.95■■■■□ 3.18
CLU-214ENST00000523396 BAZ1BQ9UIG0 1483 aaKnown RBP34.92■■■■□ 3.18
CLU-214ENST00000523396 WIZO95785 1651 aa34.75■■■■□ 3.15
CLU-214ENST00000523396 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
CLU-214ENST00000523396 NESP48681 1621 aa34.5■■■■□ 3.11
CLU-214ENST00000523396 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
CLU-214ENST00000523396 LAMC3Q9Y6N6 1575 aa34.32■■■■□ 3.09
CLU-214ENST00000523396 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
CLU-214ENST00000523396 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
CLU-214ENST00000523396 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
CLU-214ENST00000523396 PDS5BQ9NTI5 1447 aa34.08■■■■□ 3.05
CLU-214ENST00000523396 CUX2O14529 1486 aa34.07■■■■□ 3.05
CLU-214ENST00000523396 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
CLU-214ENST00000523396 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
CLU-214ENST00000523396 CFTRP13569 1480 aa33.89■■■■□ 3.02
CLU-214ENST00000523396 FANCD2Q9BXW9 1451 aa33.81■■■■□ 3
CLU-214ENST00000523396 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
CLU-214ENST00000523396 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
CLU-214ENST00000523396 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
CLU-214ENST00000523396 WDR62O43379 1518 aa33.65■■■□□ 2.98
CLU-214ENST00000523396 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
CLU-214ENST00000523396 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
CLU-214ENST00000523396 DNAJC5Q9H3Z4 198 aa33.29■■■□□ 2.92
CLU-214ENST00000523396 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
CLU-214ENST00000523396 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
CLU-214ENST00000523396 ABCC8Q09428 1581 aa33.17■■■□□ 2.9
CLU-214ENST00000523396 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
CLU-214ENST00000523396 ZNF608Q9ULD9 1512 aaPredicted RBP32.98■■■□□ 2.87
CLU-214ENST00000523396 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
CLU-214ENST00000523396 CUX1P39880 1505 aa32.92■■■□□ 2.86
CLU-214ENST00000523396 TARBP1Q13395 1621 aaKnown RBP32.89■■■□□ 2.86
CLU-214ENST00000523396 EIF4G3O43432 1585 aaKnown RBP32.86■■■□□ 2.85
CLU-214ENST00000523396 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
CLU-214ENST00000523396 RAD54L2Q9Y4B4 1467 aa32.84■■■□□ 2.85
CLU-214ENST00000523396 SOGA1O94964 1423 aa32.8■■■□□ 2.84
CLU-214ENST00000523396 AQRO60306 1485 aaKnown RBP eCLIP32.76■■■□□ 2.841e-28■□□□□ 9.5
CLU-214ENST00000523396 TDRD9Q8NDG6 1382 aaKnown RBP32.67■■■□□ 2.82
CLU-214ENST00000523396 OSCARQ8IYS5 282 aa32.65■■■□□ 2.82
CLU-214ENST00000523396 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
CLU-214ENST00000523396 WDR97A6NE52 1622 aa32.6■■■□□ 2.81
CLU-214ENST00000523396 SYNJ1O43426 1573 aa32.59■■■□□ 2.81
CLU-214ENST00000523396 BIVM-ERCC5R4GMW8 1640 aa32.58■■■□□ 2.81
CLU-214ENST00000523396 TOP2BQ02880 1626 aa32.57■■■□□ 2.8
CLU-214ENST00000523396 CHD1O14646 1710 aa32.54■■■□□ 2.8
CLU-214ENST00000523396 FBLN2P98095 1184 aa32.47■■■□□ 2.79
CLU-214ENST00000523396 SNAPC4Q5SXM2 1469 aa32.47■■■□□ 2.79
CLU-214ENST00000523396 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
CLU-214ENST00000523396 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
CLU-214ENST00000523396 GRIN2BQ13224 1484 aa32.42■■■□□ 2.78
CLU-214ENST00000523396 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
CLU-214ENST00000523396 ABCA5Q8WWZ7 1642 aa32.4■■■□□ 2.78
CLU-214ENST00000523396 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
CLU-214ENST00000523396 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
CLU-214ENST00000523396 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
CLU-214ENST00000523396 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
CLU-214ENST00000523396 RIMBP3CA6NJZ7 1639 aa32.22■■■□□ 2.75
CLU-214ENST00000523396 RIMBP3BA6NNM3 1639 aa32.22■■■□□ 2.75
CLU-214ENST00000523396 RIMBP3Q9UFD9 1639 aa32.22■■■□□ 2.75
CLU-214ENST00000523396 ARHGEF11O15085 1522 aa32.15■■■□□ 2.74
CLU-214ENST00000523396 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
CLU-214ENST00000523396 ERICH3Q5RHP9 1530 aa32.08■■■□□ 2.73
CLU-214ENST00000523396 CLASP1Q7Z460 1538 aa32.08■■■□□ 2.73
CLU-214ENST00000523396 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
CLU-214ENST00000523396 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.72
CLU-214ENST00000523396 KIF27Q86VH2 1401 aa31.93■■■□□ 2.7
CLU-214ENST00000523396 CEP170Q5SW79 1584 aa31.91■■■□□ 2.7
CLU-214ENST00000523396 CYB5RLQ6IPT4 315 aa31.89■■■□□ 2.7
CLU-214ENST00000523396 ARAP1Q96P48 1450 aa31.87■■■□□ 2.69
CLU-214ENST00000523396 NUP160Q12769 1436 aa31.85■■■□□ 2.69
CLU-214ENST00000523396 IGF1RP08069 1367 aa31.81■■■□□ 2.68
CLU-214ENST00000523396 CUL7Q14999 1698 aa31.8■■■□□ 2.68
CLU-214ENST00000523396 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
CLU-214ENST00000523396 SHROOM2Q13796 1616 aa31.67■■■□□ 2.66
CLU-214ENST00000523396 CARMIL1Q5VZK9 1371 aa31.65■■■□□ 2.66
CLU-214ENST00000523396 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms