RNA–Protein interactions for RNA: ENST00000523148.5

MRPL43-214, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 3

Gene MRPL43, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-214ENST00000523148 NISCHQ9Y2I1 1504 aa57.15■■■■■ 6.74
MRPL43-214ENST00000523148 CCDC180Q9P1Z9 1646 aa50.73■■■■■ 5.71
MRPL43-214ENST00000523148 ABCC9O60706 1549 aa49.79■■■■■ 5.56
MRPL43-214ENST00000523148 DCAF8L2P0C7V8 631 aa47.95■■■■■ 5.27
MRPL43-214ENST00000523148 RB1CC1Q8TDY2 1594 aa47.88■■■■■ 5.25
MRPL43-214ENST00000523148 NACADO15069 1562 aa47.84■■■■■ 5.25
MRPL43-214ENST00000523148 MYO15BQ96JP2 1530 aa47.58■■■■■ 5.21
MRPL43-214ENST00000523148 ZCCHC6Q5VYS8 1495 aaKnown RBP47.55■■■■■ 5.2
MRPL43-214ENST00000523148 DCAF1Q9Y4B6 1507 aa47.32■■■■■ 5.17
MRPL43-214ENST00000523148 PABPN1Q86U42 306 aaKnown RBP eCLIP46.62■■■■■ 5.05
MRPL43-214ENST00000523148 UNC13AQ9UPW8 1703 aa46.51■■■■■ 5.04
MRPL43-214ENST00000523148 BICRAQ9NZM4 1560 aa46.34■■■■■ 5.01
MRPL43-214ENST00000523148 SCRIBQ14160 1630 aa46.26■■■■■ 5
MRPL43-214ENST00000523148 SHROOM4Q9ULL8 1493 aa46■■■■■ 4.95
MRPL43-214ENST00000523148 DNAJC5BQ9UF47 199 aa45.84■■■■■ 4.93
MRPL43-214ENST00000523148 EIF4G1Q04637 1599 aaKnown RBP45.16■■■■■ 4.82
MRPL43-214ENST00000523148 CC2D2AQ9P2K1 1620 aa44.97■■■■■ 4.79
MRPL43-214ENST00000523148 CECR2Q9BXF3 1484 aa44.79■■■■■ 4.76
MRPL43-214ENST00000523148 BAZ1AQ9NRL2 1556 aaPredicted RBP44.31■■■■■ 4.68
MRPL43-214ENST00000523148 SMARCA4P51532 1647 aa44.28■■■■■ 4.68
MRPL43-214ENST00000523148 NCAPD3P42695 1498 aa44.21■■■■■ 4.67
MRPL43-214ENST00000523148 ATAD2BQ9ULI0 1458 aa44.16■■■■■ 4.66
MRPL43-214ENST00000523148 SMARCA2P51531 1590 aa44.1■■■■■ 4.65
MRPL43-214ENST00000523148 MROH2BQ7Z745 1585 aa44■■■■■ 4.63
MRPL43-214ENST00000523148 PEG3Q9GZU2 1588 aa43.89■■■■■ 4.62
MRPL43-214ENST00000523148 HMGXB3Q12766 1538 aa43.88■■■■■ 4.61
MRPL43-214ENST00000523148 BAZ1BQ9UIG0 1483 aaKnown RBP43.79■■■■■ 4.6
MRPL43-214ENST00000523148 RSF1Q96T23 1441 aaPredicted RBP43.56■■■■■ 4.56
MRPL43-214ENST00000523148 WIZO95785 1651 aa43.44■■■■■ 4.54
MRPL43-214ENST00000523148 TOP2AP11388 1531 aaKnown RBP43.06■■■■■ 4.48
MRPL43-214ENST00000523148 NESP48681 1621 aa43.02■■■■■ 4.48
MRPL43-214ENST00000523148 ERCC6Q03468 1493 aa42.98■■■■■ 4.47
MRPL43-214ENST00000523148 LAMC3Q9Y6N6 1575 aa42.95■■■■■ 4.47
MRPL43-214ENST00000523148 CADPSQ9ULU8 1353 aa42.94■■■■■ 4.46
MRPL43-214ENST00000523148 PDS5BQ9NTI5 1447 aa42.8■■■■■ 4.44
MRPL43-214ENST00000523148 CCDC88BA6NC98 1476 aa42.62■■■■■ 4.41
MRPL43-214ENST00000523148 CFTRP13569 1480 aa42.62■■■■■ 4.41
MRPL43-214ENST00000523148 CUX2O14529 1486 aa42.55■■■■■ 4.4
MRPL43-214ENST00000523148 SUPT5HO00267 1087 aaKnown RBP42.49■■■■■ 4.39
MRPL43-214ENST00000523148 KIF21AQ7Z4S6 1674 aa42.38■■■■■ 4.38
MRPL43-214ENST00000523148 FANCD2Q9BXW9 1451 aa42.36■■■■■ 4.37
MRPL43-214ENST00000523148 THOC2Q8NI27 1593 aaKnown RBP42.31■■■■■ 4.36
MRPL43-214ENST00000523148 CEP164Q9UPV0 1460 aa42.3■■■■■ 4.36
MRPL43-214ENST00000523148 MRC2Q9UBG0 1479 aa42.27■■■■■ 4.36
MRPL43-214ENST00000523148 WDR62O43379 1518 aa42.07■■■■■ 4.33
MRPL43-214ENST00000523148 PRDM2Q13029 1718 aa42.01■■■■■ 4.32
MRPL43-214ENST00000523148 URB2Q14146 1524 aaKnown RBP41.89■■■■■ 4.3
MRPL43-214ENST00000523148 ABCC8Q09428 1581 aa41.77■■■■■ 4.28
MRPL43-214ENST00000523148 TOPBP1Q92547 1522 aa41.65■■■■■ 4.26
MRPL43-214ENST00000523148 DNMBPQ6XZF7 1577 aa41.57■■■■■ 4.25
MRPL43-214ENST00000523148 IFT140Q96RY7 1462 aa41.47■■■■■ 4.23
MRPL43-214ENST00000523148 DNAJC5Q9H3Z4 198 aa41.45■■■■■ 4.23
MRPL43-214ENST00000523148 POLA1P09884 1462 aaPredicted RBP41.29■■■■■ 4.2
MRPL43-214ENST00000523148 CUX1P39880 1505 aa41.27■■■■■ 4.2
MRPL43-214ENST00000523148 SOGA1O94964 1423 aa41.23■■■■■ 4.19
MRPL43-214ENST00000523148 ZNF608Q9ULD9 1512 aaPredicted RBP41.2■■■■■ 4.19
MRPL43-214ENST00000523148 FGD5Q6ZNL6 1462 aa41.17■■■■■ 4.18
MRPL43-214ENST00000523148 TARBP1Q13395 1621 aaKnown RBP41.13■■■■■ 4.17
MRPL43-214ENST00000523148 RAD54L2Q9Y4B4 1467 aa41.12■■■■■ 4.17
MRPL43-214ENST00000523148 WRNQ14191 1432 aaPredicted RBP eCLIP41.09■■■■■ 4.17
MRPL43-214ENST00000523148 AQRO60306 1485 aaKnown RBP eCLIP41.02■■■■■ 4.165e-8■■■■□ 19.3
MRPL43-214ENST00000523148 TDRD9Q8NDG6 1382 aaKnown RBP40.98■■■■■ 4.15
MRPL43-214ENST00000523148 OSCARQ8IYS5 282 aa40.94■■■■■ 4.14
MRPL43-214ENST00000523148 EIF4G3O43432 1585 aaKnown RBP40.94■■■■■ 4.14
MRPL43-214ENST00000523148 TOP2BQ02880 1626 aa40.9■■■■■ 4.14
MRPL43-214ENST00000523148 WDR97A6NE52 1622 aa40.87■■■■■ 4.13
MRPL43-214ENST00000523148 BIVM-ERCC5R4GMW8 1640 aa40.84■■■■■ 4.13
MRPL43-214ENST00000523148 SYNJ1O43426 1573 aa40.82■■■■■ 4.13
MRPL43-214ENST00000523148 ABCA10Q8WWZ4 1543 aa40.82■■■■■ 4.12
MRPL43-214ENST00000523148 GRIN2BQ13224 1484 aa40.72■■■■■ 4.11
MRPL43-214ENST00000523148 GAPVD1Q14C86 1478 aa40.7■■■■■ 4.11
MRPL43-214ENST00000523148 FBLN2P98095 1184 aa40.66■■■■■ 4.1
MRPL43-214ENST00000523148 MAGI1Q96QZ7 1491 aaPredicted RBP40.6■■■■■ 4.09
MRPL43-214ENST00000523148 SNAPC4Q5SXM2 1469 aa40.59■■■■■ 4.09
MRPL43-214ENST00000523148 CHMP7Q8WUX9 453 aaPredicted RBP40.57■■■■■ 4.09
MRPL43-214ENST00000523148 ABCA5Q8WWZ7 1642 aa40.53■■■■■ 4.08
MRPL43-214ENST00000523148 SYNJ2O15056 1496 aa40.45■■■■■ 4.07
MRPL43-214ENST00000523148 PBRM1Q86U86 1689 aa40.39■■■■■ 4.06
MRPL43-214ENST00000523148 CHD1O14646 1710 aa40.38■■■■■ 4.05
MRPL43-214ENST00000523148 ERICH3Q5RHP9 1530 aa40.32■■■■■ 4.04
MRPL43-214ENST00000523148 KIF27Q86VH2 1401 aa40.28■■■■■ 4.04
MRPL43-214ENST00000523148 FHAD1B1AJZ9 1412 aa40.26■■■■■ 4.04
MRPL43-214ENST00000523148 TRIM41Q8WV44 630 aa40.2■■■■■ 4.03
MRPL43-214ENST00000523148 ADAMTS12P58397 1594 aa40.16■■■■■ 4.02
MRPL43-214ENST00000523148 GRIN2AQ12879 1464 aa40.14■■■■■ 4.02
MRPL43-214ENST00000523148 IGF1RP08069 1367 aa40.14■■■■■ 4.02
MRPL43-214ENST00000523148 CLASP1Q7Z460 1538 aa40.06■■■■■ 4
MRPL43-214ENST00000523148 ARHGEF11O15085 1522 aa40.05■■■■■ 4
MRPL43-214ENST00000523148 NUP160Q12769 1436 aa39.99■■■■□ 3.99
MRPL43-214ENST00000523148 RIMBP3CA6NJZ7 1639 aa39.99■■■■□ 3.99
MRPL43-214ENST00000523148 RIMBP3BA6NNM3 1639 aa39.99■■■■□ 3.99
MRPL43-214ENST00000523148 RIMBP3Q9UFD9 1639 aa39.99■■■■□ 3.99
MRPL43-214ENST00000523148 CARMIL1Q5VZK9 1371 aa39.91■■■■□ 3.98
MRPL43-214ENST00000523148 CUL7Q14999 1698 aa39.86■■■■□ 3.97
MRPL43-214ENST00000523148 CEP170Q5SW79 1584 aa39.85■■■■□ 3.97
MRPL43-214ENST00000523148 CYB5RLQ6IPT4 315 aa39.85■■■■□ 3.97
MRPL43-214ENST00000523148 RUSC2Q8N2Y8 1516 aa39.75■■■■□ 3.95
MRPL43-214ENST00000523148 JPH4Q96JJ6 628 aa39.73■■■■□ 3.95
MRPL43-214ENST00000523148 ARAP1Q96P48 1450 aa39.72■■■■□ 3.95
MRPL43-214ENST00000523148 KIAA0586Q9BVV6 1533 aa39.64■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms