RNA–Protein interactions for RNA: ENST00000522978.1

UBXN2B-204, Transcript of UBX domain protein 2B, humanhuman

TSL 3

Gene UBXN2B, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-204ENST00000522978 NISCHQ9Y2I1 1504 aa43.45■■■■■ 4.55
UBXN2B-204ENST00000522978 ABCC9O60706 1549 aa39.41■■■■□ 3.9
UBXN2B-204ENST00000522978 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
UBXN2B-204ENST00000522978 RB1CC1Q8TDY2 1594 aa37.31■■■■□ 3.56
UBXN2B-204ENST00000522978 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
UBXN2B-204ENST00000522978 NACADO15069 1562 aa36.96■■■■□ 3.51
UBXN2B-204ENST00000522978 DCAF8L2P0C7V8 631 aa36.95■■■■□ 3.51
UBXN2B-204ENST00000522978 PABPN1Q86U42 306 aaKnown RBP eCLIP36.69■■■■□ 3.46
UBXN2B-204ENST00000522978 UNC13AQ9UPW8 1703 aa36.58■■■■□ 3.45
UBXN2B-204ENST00000522978 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
UBXN2B-204ENST00000522978 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
UBXN2B-204ENST00000522978 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
UBXN2B-204ENST00000522978 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
UBXN2B-204ENST00000522978 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
UBXN2B-204ENST00000522978 SHROOM4Q9ULL8 1493 aa35.59■■■■□ 3.29
UBXN2B-204ENST00000522978 CC2D2AQ9P2K1 1620 aa35.55■■■■□ 3.28
UBXN2B-204ENST00000522978 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
UBXN2B-204ENST00000522978 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
UBXN2B-204ENST00000522978 DNAJC5Q9H3Z4 198 aa34.22■■■■□ 3.07
UBXN2B-204ENST00000522978 NCAPD3P42695 1498 aa34.13■■■■□ 3.05
UBXN2B-204ENST00000522978 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
UBXN2B-204ENST00000522978 ERCC6Q03468 1493 aa34.01■■■■□ 3.04
UBXN2B-204ENST00000522978 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
UBXN2B-204ENST00000522978 CUX2O14529 1486 aa33.93■■■■□ 3.02
UBXN2B-204ENST00000522978 SMARCA2P51531 1590 aa33.9■■■■□ 3.02
UBXN2B-204ENST00000522978 HMGXB3Q12766 1538 aa33.85■■■■□ 3.01
UBXN2B-204ENST00000522978 NESP48681 1621 aa33.8■■■■□ 3
UBXN2B-204ENST00000522978 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
UBXN2B-204ENST00000522978 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
UBXN2B-204ENST00000522978 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
UBXN2B-204ENST00000522978 MROH2BQ7Z745 1585 aa33.53■■■□□ 2.96
UBXN2B-204ENST00000522978 THOC2Q8NI27 1593 aaKnown RBP33.43■■■□□ 2.94
UBXN2B-204ENST00000522978 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
UBXN2B-204ENST00000522978 KIF21AQ7Z4S6 1674 aa33.36■■■□□ 2.93
UBXN2B-204ENST00000522978 PDS5BQ9NTI5 1447 aa33.23■■■□□ 2.91
UBXN2B-204ENST00000522978 WIZO95785 1651 aa33.16■■■□□ 2.9
UBXN2B-204ENST00000522978 CADPSQ9ULU8 1353 aa33.11■■■□□ 2.89
UBXN2B-204ENST00000522978 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
UBXN2B-204ENST00000522978 WDR62O43379 1518 aa32.89■■■□□ 2.86
UBXN2B-204ENST00000522978 RSF1Q96T23 1441 aaPredicted RBP32.86■■■□□ 2.85
UBXN2B-204ENST00000522978 CEP164Q9UPV0 1460 aa32.81■■■□□ 2.84
UBXN2B-204ENST00000522978 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
UBXN2B-204ENST00000522978 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
UBXN2B-204ENST00000522978 CFTRP13569 1480 aa32.67■■■□□ 2.82
UBXN2B-204ENST00000522978 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
UBXN2B-204ENST00000522978 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
UBXN2B-204ENST00000522978 OSCARQ8IYS5 282 aa32.4■■■□□ 2.78
UBXN2B-204ENST00000522978 PRDM2Q13029 1718 aa32.39■■■□□ 2.78
UBXN2B-204ENST00000522978 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
UBXN2B-204ENST00000522978 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
UBXN2B-204ENST00000522978 IFT140Q96RY7 1462 aa32.14■■■□□ 2.74
UBXN2B-204ENST00000522978 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
UBXN2B-204ENST00000522978 RIMBP3CA6NJZ7 1639 aa32.05■■■□□ 2.72
UBXN2B-204ENST00000522978 RIMBP3BA6NNM3 1639 aa32.05■■■□□ 2.72
UBXN2B-204ENST00000522978 RIMBP3Q9UFD9 1639 aa32.05■■■□□ 2.72
UBXN2B-204ENST00000522978 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
UBXN2B-204ENST00000522978 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
UBXN2B-204ENST00000522978 ABCC8Q09428 1581 aa31.96■■■□□ 2.71
UBXN2B-204ENST00000522978 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
UBXN2B-204ENST00000522978 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
UBXN2B-204ENST00000522978 AQRO60306 1485 aaKnown RBP eCLIP31.88■■■□□ 2.69
UBXN2B-204ENST00000522978 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
UBXN2B-204ENST00000522978 CHD1O14646 1710 aa31.84■■■□□ 2.69
UBXN2B-204ENST00000522978 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
UBXN2B-204ENST00000522978 FBLN2P98095 1184 aa31.77■■■□□ 2.68
UBXN2B-204ENST00000522978 CYB5RLQ6IPT4 315 aa31.74■■■□□ 2.67
UBXN2B-204ENST00000522978 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
UBXN2B-204ENST00000522978 TDRD9Q8NDG6 1382 aaKnown RBP31.66■■■□□ 2.66
UBXN2B-204ENST00000522978 SOGA1O94964 1423 aa31.65■■■□□ 2.66
UBXN2B-204ENST00000522978 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
UBXN2B-204ENST00000522978 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
UBXN2B-204ENST00000522978 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
UBXN2B-204ENST00000522978 CUX1P39880 1505 aa31.51■■■□□ 2.63
UBXN2B-204ENST00000522978 TRHP20396 242 aaPredicted RBP31.48■■■□□ 2.63
UBXN2B-204ENST00000522978 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
UBXN2B-204ENST00000522978 WDR97A6NE52 1622 aa31.41■■■□□ 2.62
UBXN2B-204ENST00000522978 CLASP1Q7Z460 1538 aa31.38■■■□□ 2.61
UBXN2B-204ENST00000522978 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
UBXN2B-204ENST00000522978 MAGI1Q96QZ7 1491 aaPredicted RBP31.36■■■□□ 2.61
UBXN2B-204ENST00000522978 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
UBXN2B-204ENST00000522978 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
UBXN2B-204ENST00000522978 SYNJ2O15056 1496 aa31.28■■■□□ 2.6
UBXN2B-204ENST00000522978 GAPVD1Q14C86 1478 aa31.25■■■□□ 2.59
UBXN2B-204ENST00000522978 ABCA5Q8WWZ7 1642 aa31.15■■■□□ 2.58
UBXN2B-204ENST00000522978 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.58
UBXN2B-204ENST00000522978 BIVM-ERCC5R4GMW8 1640 aa31.06■■■□□ 2.56
UBXN2B-204ENST00000522978 TOP2BQ02880 1626 aa31.02■■■□□ 2.56
UBXN2B-204ENST00000522978 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
UBXN2B-204ENST00000522978 ERCC6L2Q5T890 1561 aa30.97■■■□□ 2.55
UBXN2B-204ENST00000522978 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
UBXN2B-204ENST00000522978 ADAMTS12P58397 1594 aa30.94■■■□□ 2.54
UBXN2B-204ENST00000522978 CEP170Q5SW79 1584 aa30.91■■■□□ 2.54
UBXN2B-204ENST00000522978 NUP160Q12769 1436 aa30.84■■■□□ 2.53
UBXN2B-204ENST00000522978 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
UBXN2B-204ENST00000522978 SHROOM2Q13796 1616 aa30.75■■■□□ 2.51
UBXN2B-204ENST00000522978 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
UBXN2B-204ENST00000522978 AEBP2Q6ZN18 517 aaPredicted RBP30.71■■■□□ 2.51
UBXN2B-204ENST00000522978 PRG4Q92954 1404 aaPredicted RBP30.64■■■□□ 2.49
UBXN2B-204ENST00000522978 JPH4Q96JJ6 628 aa30.58■■■□□ 2.49
UBXN2B-204ENST00000522978 KIF13AQ9H1H9 1805 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms