RNA–Protein interactions for RNA: ENST00000522944.5

PBK-203, Transcript of PDZ binding kinase, humanhuman

TSL 2 BASIC

Gene PBK, Length 1,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBK-203ENST00000522944 NISCHQ9Y2I1 1504 aa43.8■■■■■ 4.6
PBK-203ENST00000522944 CCDC180Q9P1Z9 1646 aa38.76■■■■□ 3.8
PBK-203ENST00000522944 ABCC9O60706 1549 aa37.57■■■■□ 3.61
PBK-203ENST00000522944 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
PBK-203ENST00000522944 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
PBK-203ENST00000522944 NACADO15069 1562 aa36.34■■■■□ 3.41
PBK-203ENST00000522944 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
PBK-203ENST00000522944 DCAF1Q9Y4B6 1507 aa36.23■■■■□ 3.39
PBK-203ENST00000522944 MYO15BQ96JP2 1530 aa36.21■■■■□ 3.39
PBK-203ENST00000522944 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
PBK-203ENST00000522944 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
PBK-203ENST00000522944 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
PBK-203ENST00000522944 BICRAQ9NZM4 1560 aa35.16■■■■□ 3.22
PBK-203ENST00000522944 SHROOM4Q9ULL8 1493 aa34.93■■■■□ 3.18
PBK-203ENST00000522944 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
PBK-203ENST00000522944 CECR2Q9BXF3 1484 aa34.09■■■■□ 3.05
PBK-203ENST00000522944 DNAJC5BQ9UF47 199 aa34.06■■■■□ 3.04
PBK-203ENST00000522944 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
PBK-203ENST00000522944 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
PBK-203ENST00000522944 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
PBK-203ENST00000522944 MROH2BQ7Z745 1585 aa33.78■■■■□ 3
PBK-203ENST00000522944 ATAD2BQ9ULI0 1458 aa33.61■■■□□ 2.97
PBK-203ENST00000522944 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
PBK-203ENST00000522944 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
PBK-203ENST00000522944 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
PBK-203ENST00000522944 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
PBK-203ENST00000522944 WIZO95785 1651 aa33.46■■■□□ 2.95
PBK-203ENST00000522944 HMGXB3Q12766 1538 aa33.4■■■□□ 2.94
PBK-203ENST00000522944 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
PBK-203ENST00000522944 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
PBK-203ENST00000522944 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
PBK-203ENST00000522944 CCDC88BA6NC98 1476 aa32.72■■■□□ 2.83
PBK-203ENST00000522944 NESP48681 1621 aa32.63■■■□□ 2.81
PBK-203ENST00000522944 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
PBK-203ENST00000522944 CADPSQ9ULU8 1353 aa32.57■■■□□ 2.81
PBK-203ENST00000522944 CFTRP13569 1480 aa32.47■■■□□ 2.79
PBK-203ENST00000522944 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
PBK-203ENST00000522944 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
PBK-203ENST00000522944 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
PBK-203ENST00000522944 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
PBK-203ENST00000522944 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
PBK-203ENST00000522944 CEP164Q9UPV0 1460 aa32.15■■■□□ 2.74
PBK-203ENST00000522944 THOC2Q8NI27 1593 aaKnown RBP32.03■■■□□ 2.72
PBK-203ENST00000522944 MRC2Q9UBG0 1479 aa32.01■■■□□ 2.71
PBK-203ENST00000522944 WDR62O43379 1518 aa31.88■■■□□ 2.69
PBK-203ENST00000522944 URB2Q14146 1524 aaKnown RBP31.86■■■□□ 2.69
PBK-203ENST00000522944 CUX2O14529 1486 aa31.82■■■□□ 2.68
PBK-203ENST00000522944 DNMBPQ6XZF7 1577 aa31.76■■■□□ 2.67
PBK-203ENST00000522944 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
PBK-203ENST00000522944 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
PBK-203ENST00000522944 CUX1P39880 1505 aa31.66■■■□□ 2.66
PBK-203ENST00000522944 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.65
PBK-203ENST00000522944 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
PBK-203ENST00000522944 TOP2BQ02880 1626 aa31.51■■■□□ 2.63
PBK-203ENST00000522944 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
PBK-203ENST00000522944 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
PBK-203ENST00000522944 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
PBK-203ENST00000522944 IFT140Q96RY7 1462 aa31.44■■■□□ 2.62
PBK-203ENST00000522944 SOGA1O94964 1423 aa31.39■■■□□ 2.62
PBK-203ENST00000522944 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
PBK-203ENST00000522944 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
PBK-203ENST00000522944 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
PBK-203ENST00000522944 WDR97A6NE52 1622 aa31.22■■■□□ 2.59
PBK-203ENST00000522944 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.58
PBK-203ENST00000522944 TRIM41Q8WV44 630 aa31.2■■■□□ 2.58
PBK-203ENST00000522944 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
PBK-203ENST00000522944 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
PBK-203ENST00000522944 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.582e-9■■■□□ 18.8
PBK-203ENST00000522944 CHIC1Q5VXU3 224 aa31.06■■■□□ 2.56
PBK-203ENST00000522944 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
PBK-203ENST00000522944 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
PBK-203ENST00000522944 GRIN2BQ13224 1484 aa30.97■■■□□ 2.55
PBK-203ENST00000522944 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
PBK-203ENST00000522944 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
PBK-203ENST00000522944 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.54
PBK-203ENST00000522944 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
PBK-203ENST00000522944 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
PBK-203ENST00000522944 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
PBK-203ENST00000522944 FBLN2P98095 1184 aa30.75■■■□□ 2.51
PBK-203ENST00000522944 ADAMTS12P58397 1594 aa30.73■■■□□ 2.51
PBK-203ENST00000522944 IGF1RP08069 1367 aa30.73■■■□□ 2.51
PBK-203ENST00000522944 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
PBK-203ENST00000522944 CHD1O14646 1710 aa30.72■■■□□ 2.51
PBK-203ENST00000522944 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.5
PBK-203ENST00000522944 FHAD1B1AJZ9 1412 aa30.68■■■□□ 2.5
PBK-203ENST00000522944 CUL7Q14999 1698 aa30.66■■■□□ 2.5
PBK-203ENST00000522944 EEA1Q15075 1411 aa30.6■■■□□ 2.49
PBK-203ENST00000522944 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
PBK-203ENST00000522944 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
PBK-203ENST00000522944 CARMIL1Q5VZK9 1371 aa30.57■■■□□ 2.48
PBK-203ENST00000522944 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
PBK-203ENST00000522944 CSRNP3Q8WYN3 585 aa30.51■■■□□ 2.48
PBK-203ENST00000522944 RAPGEF2Q9Y4G8 1499 aa30.45■■■□□ 2.46
PBK-203ENST00000522944 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
PBK-203ENST00000522944 PRXQ9BXM0 1461 aa30.42■■■□□ 2.46
PBK-203ENST00000522944 NUP160Q12769 1436 aa30.4■■■□□ 2.46
PBK-203ENST00000522944 CLASP1Q7Z460 1538 aa30.36■■■□□ 2.45
PBK-203ENST00000522944 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
PBK-203ENST00000522944 KIF21BO75037 1637 aa30.27■■■□□ 2.44
PBK-203ENST00000522944 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms