RNA–Protein interactions for RNA: ENST00000522699.1

RAD21-208, Transcript of RAD21 cohesin complex component, humanhuman

TSL 3

Gene RAD21, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21-208ENST00000522699 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
RAD21-208ENST00000522699 ABCC9O60706 1549 aa38.24■■■■□ 3.71
RAD21-208ENST00000522699 CCDC180Q9P1Z9 1646 aa38.14■■■■□ 3.7
RAD21-208ENST00000522699 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
RAD21-208ENST00000522699 NACADO15069 1562 aa36.14■■■■□ 3.38
RAD21-208ENST00000522699 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
RAD21-208ENST00000522699 DNAJC5BQ9UF47 199 aa35.91■■■■□ 3.34
RAD21-208ENST00000522699 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
RAD21-208ENST00000522699 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
RAD21-208ENST00000522699 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
RAD21-208ENST00000522699 ZCCHC6Q5VYS8 1495 aaKnown RBP35.28■■■■□ 3.24
RAD21-208ENST00000522699 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
RAD21-208ENST00000522699 DCAF1Q9Y4B6 1507 aa35.17■■■■□ 3.22
RAD21-208ENST00000522699 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
RAD21-208ENST00000522699 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
RAD21-208ENST00000522699 CC2D2AQ9P2K1 1620 aa34.49■■■■□ 3.11
RAD21-208ENST00000522699 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
RAD21-208ENST00000522699 EIF4G1Q04637 1599 aaKnown RBP34.43■■■■□ 3.1
RAD21-208ENST00000522699 NCAPD3P42695 1498 aa33.39■■■□□ 2.94
RAD21-208ENST00000522699 ATAD2BQ9ULI0 1458 aa33.28■■■□□ 2.92
RAD21-208ENST00000522699 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
RAD21-208ENST00000522699 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
RAD21-208ENST00000522699 HMGXB3Q12766 1538 aa33.08■■■□□ 2.89
RAD21-208ENST00000522699 BAZ1AQ9NRL2 1556 aaPredicted RBP33.07■■■□□ 2.88
RAD21-208ENST00000522699 ERCC6Q03468 1493 aa33.04■■■□□ 2.88
RAD21-208ENST00000522699 DNAJC5Q9H3Z4 198 aa33■■■□□ 2.87
RAD21-208ENST00000522699 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
RAD21-208ENST00000522699 CUX2O14529 1486 aa32.94■■■□□ 2.86
RAD21-208ENST00000522699 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
RAD21-208ENST00000522699 NESP48681 1621 aa32.83■■■□□ 2.85
RAD21-208ENST00000522699 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
RAD21-208ENST00000522699 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
RAD21-208ENST00000522699 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
RAD21-208ENST00000522699 THOC2Q8NI27 1593 aaKnown RBP32.42■■■□□ 2.78
RAD21-208ENST00000522699 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
RAD21-208ENST00000522699 WIZO95785 1651 aa32.39■■■□□ 2.78
RAD21-208ENST00000522699 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
RAD21-208ENST00000522699 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
RAD21-208ENST00000522699 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
RAD21-208ENST00000522699 WDR62O43379 1518 aa32.03■■■□□ 2.72
RAD21-208ENST00000522699 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
RAD21-208ENST00000522699 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
RAD21-208ENST00000522699 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
RAD21-208ENST00000522699 CFTRP13569 1480 aa32■■■□□ 2.71
RAD21-208ENST00000522699 URB2Q14146 1524 aaKnown RBP31.71■■■□□ 2.67
RAD21-208ENST00000522699 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
RAD21-208ENST00000522699 TRIM41Q8WV44 630 aa31.58■■■□□ 2.65
RAD21-208ENST00000522699 OSCARQ8IYS5 282 aa31.55■■■□□ 2.64
RAD21-208ENST00000522699 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
RAD21-208ENST00000522699 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
RAD21-208ENST00000522699 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
RAD21-208ENST00000522699 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
RAD21-208ENST00000522699 ZNF608Q9ULD9 1512 aaPredicted RBP31.33■■■□□ 2.61
RAD21-208ENST00000522699 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
RAD21-208ENST00000522699 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
RAD21-208ENST00000522699 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.572e-7■■■□□ 15
RAD21-208ENST00000522699 POLA1P09884 1462 aaPredicted RBP31.06■■■□□ 2.56
RAD21-208ENST00000522699 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
RAD21-208ENST00000522699 SOGA1O94964 1423 aa30.98■■■□□ 2.55
RAD21-208ENST00000522699 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
RAD21-208ENST00000522699 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
RAD21-208ENST00000522699 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
RAD21-208ENST00000522699 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
RAD21-208ENST00000522699 FBLN2P98095 1184 aa30.97■■■□□ 2.55
RAD21-208ENST00000522699 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
RAD21-208ENST00000522699 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
RAD21-208ENST00000522699 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
RAD21-208ENST00000522699 FGD5Q6ZNL6 1462 aa30.87■■■□□ 2.53
RAD21-208ENST00000522699 CHD1O14646 1710 aa30.84■■■□□ 2.53
RAD21-208ENST00000522699 CUX1P39880 1505 aa30.83■■■□□ 2.53
RAD21-208ENST00000522699 CYB5RLQ6IPT4 315 aa30.81■■■□□ 2.52
RAD21-208ENST00000522699 WDR97A6NE52 1622 aa30.75■■■□□ 2.51
RAD21-208ENST00000522699 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
RAD21-208ENST00000522699 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
RAD21-208ENST00000522699 GRIN2BQ13224 1484 aa30.69■■■□□ 2.5
RAD21-208ENST00000522699 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
RAD21-208ENST00000522699 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
RAD21-208ENST00000522699 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
RAD21-208ENST00000522699 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
RAD21-208ENST00000522699 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
RAD21-208ENST00000522699 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
RAD21-208ENST00000522699 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
RAD21-208ENST00000522699 TRHP20396 242 aaPredicted RBP30.49■■■□□ 2.47
RAD21-208ENST00000522699 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
RAD21-208ENST00000522699 PBRM1Q86U86 1689 aa30.44■■■□□ 2.46
RAD21-208ENST00000522699 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
RAD21-208ENST00000522699 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
RAD21-208ENST00000522699 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
RAD21-208ENST00000522699 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
RAD21-208ENST00000522699 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
RAD21-208ENST00000522699 ADAMTS12P58397 1594 aa30.19■■■□□ 2.42
RAD21-208ENST00000522699 NUP160Q12769 1436 aa30.16■■■□□ 2.42
RAD21-208ENST00000522699 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
RAD21-208ENST00000522699 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
RAD21-208ENST00000522699 ERCC6L2Q5T890 1561 aa30.06■■■□□ 2.4
RAD21-208ENST00000522699 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
RAD21-208ENST00000522699 JPH4Q96JJ6 628 aa29.95■■■□□ 2.39
RAD21-208ENST00000522699 PRG4Q92954 1404 aaPredicted RBP29.92■■■□□ 2.38
RAD21-208ENST00000522699 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
RAD21-208ENST00000522699 IGF1RP08069 1367 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms