RNA–Protein interactions for RNA: ENST00000522605.1

PCDHGB2-201, Transcript of protocadherin gamma subfamily B, 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB2, Length 4,602 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB2-201ENST00000522605 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
PCDHGB2-201ENST00000522605 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
PCDHGB2-201ENST00000522605 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
PCDHGB2-201ENST00000522605 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.91
PCDHGB2-201ENST00000522605 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
PCDHGB2-201ENST00000522605 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
PCDHGB2-201ENST00000522605 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
PCDHGB2-201ENST00000522605 HRCP23327 699 aa19.7■□□□□ 0.74
PCDHGB2-201ENST00000522605 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
PCDHGB2-201ENST00000522605 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.69
PCDHGB2-201ENST00000522605 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
PCDHGB2-201ENST00000522605 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
PCDHGB2-201ENST00000522605 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
PCDHGB2-201ENST00000522605 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
PCDHGB2-201ENST00000522605 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
PCDHGB2-201ENST00000522605 APLP2Q06481 763 aa19.26■□□□□ 0.67
PCDHGB2-201ENST00000522605 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
PCDHGB2-201ENST00000522605 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
PCDHGB2-201ENST00000522605 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
PCDHGB2-201ENST00000522605 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
PCDHGB2-201ENST00000522605 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
PCDHGB2-201ENST00000522605 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
PCDHGB2-201ENST00000522605 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
PCDHGB2-201ENST00000522605 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
PCDHGB2-201ENST00000522605 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
PCDHGB2-201ENST00000522605 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
PCDHGB2-201ENST00000522605 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
PCDHGB2-201ENST00000522605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
PCDHGB2-201ENST00000522605 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
PCDHGB2-201ENST00000522605 ABCC9O60706 1549 aa18.44■□□□□ 0.54
PCDHGB2-201ENST00000522605 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
PCDHGB2-201ENST00000522605 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
PCDHGB2-201ENST00000522605 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PCDHGB2-201ENST00000522605 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
PCDHGB2-201ENST00000522605 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
PCDHGB2-201ENST00000522605 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
PCDHGB2-201ENST00000522605 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
PCDHGB2-201ENST00000522605 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
PCDHGB2-201ENST00000522605 MYT1Q01538 1121 aa18.13■□□□□ 0.49
PCDHGB2-201ENST00000522605 NEFLP07196 543 aa18.12■□□□□ 0.49
PCDHGB2-201ENST00000522605 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
PCDHGB2-201ENST00000522605 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 ITGAEP38570 1179 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 NACADO15069 1562 aa18.1■□□□□ 0.49
PCDHGB2-201ENST00000522605 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
PCDHGB2-201ENST00000522605 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
PCDHGB2-201ENST00000522605 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
PCDHGB2-201ENST00000522605 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
PCDHGB2-201ENST00000522605 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
PCDHGB2-201ENST00000522605 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHGB2-201ENST00000522605 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
PCDHGB2-201ENST00000522605 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
PCDHGB2-201ENST00000522605 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
PCDHGB2-201ENST00000522605 EEA1Q15075 1411 aa17.88■□□□□ 0.45
PCDHGB2-201ENST00000522605 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
PCDHGB2-201ENST00000522605 WIZO95785 1651 aa17.85■□□□□ 0.45
PCDHGB2-201ENST00000522605 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
PCDHGB2-201ENST00000522605 SOGA1O94964 1423 aa17.76■□□□□ 0.43
PCDHGB2-201ENST00000522605 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
PCDHGB2-201ENST00000522605 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PCDHGB2-201ENST00000522605 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PCDHGB2-201ENST00000522605 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.42
PCDHGB2-201ENST00000522605 MIER1Q8N108 512 aa17.7■□□□□ 0.42
PCDHGB2-201ENST00000522605 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
PCDHGB2-201ENST00000522605 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
PCDHGB2-201ENST00000522605 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
PCDHGB2-201ENST00000522605 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
PCDHGB2-201ENST00000522605 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
PCDHGB2-201ENST00000522605 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
PCDHGB2-201ENST00000522605 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
PCDHGB2-201ENST00000522605 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
PCDHGB2-201ENST00000522605 RUSC2Q8N2Y8 1516 aa17.48■□□□□ 0.39
PCDHGB2-201ENST00000522605 SMARCA2P51531 1590 aa17.46■□□□□ 0.38
PCDHGB2-201ENST00000522605 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
PCDHGB2-201ENST00000522605 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
PCDHGB2-201ENST00000522605 BCANQ96GW7 911 aa17.38■□□□□ 0.37
PCDHGB2-201ENST00000522605 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PCDHGB2-201ENST00000522605 ANP32CO43423 234 aa17.34■□□□□ 0.37
PCDHGB2-201ENST00000522605 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
PCDHGB2-201ENST00000522605 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
PCDHGB2-201ENST00000522605 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
PCDHGB2-201ENST00000522605 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
PCDHGB2-201ENST00000522605 FKBP8Q14318 412 aa17.23■□□□□ 0.35
PCDHGB2-201ENST00000522605 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
PCDHGB2-201ENST00000522605 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
PCDHGB2-201ENST00000522605 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
PCDHGB2-201ENST00000522605 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
PCDHGB2-201ENST00000522605 KIF21BO75037 1637 aa17.17■□□□□ 0.34
PCDHGB2-201ENST00000522605 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
PCDHGB2-201ENST00000522605 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
PCDHGB2-201ENST00000522605 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
PCDHGB2-201ENST00000522605 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
PCDHGB2-201ENST00000522605 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
PCDHGB2-201ENST00000522605 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
PCDHGB2-201ENST00000522605 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
PCDHGB2-201ENST00000522605 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
PCDHGB2-201ENST00000522605 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
PCDHGB2-201ENST00000522605 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms