RNA–Protein interactions for RNA: ENST00000522361.1

FAM49B-221, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-221ENST00000522361 NISCHQ9Y2I1 1504 aa46.31■■■■■ 5
FAM49B-221ENST00000522361 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
FAM49B-221ENST00000522361 ABCC9O60706 1549 aa41.16■■■■■ 4.18
FAM49B-221ENST00000522361 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
FAM49B-221ENST00000522361 DCAF8L2P0C7V8 631 aa39.19■■■■□ 3.86
FAM49B-221ENST00000522361 NACADO15069 1562 aa39.04■■■■□ 3.84
FAM49B-221ENST00000522361 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
FAM49B-221ENST00000522361 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.74
FAM49B-221ENST00000522361 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
FAM49B-221ENST00000522361 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
FAM49B-221ENST00000522361 DNAJC5BQ9UF47 199 aa38.27■■■■□ 3.72
FAM49B-221ENST00000522361 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
FAM49B-221ENST00000522361 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
FAM49B-221ENST00000522361 SCRIBQ14160 1630 aa37.83■■■■□ 3.65
FAM49B-221ENST00000522361 SHROOM4Q9ULL8 1493 aa37.53■■■■□ 3.6
FAM49B-221ENST00000522361 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
FAM49B-221ENST00000522361 EIF4G1Q04637 1599 aaKnown RBP37.13■■■■□ 3.53
FAM49B-221ENST00000522361 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
FAM49B-221ENST00000522361 SMARCA4P51532 1647 aa36.06■■■■□ 3.36
FAM49B-221ENST00000522361 NCAPD3P42695 1498 aa36.03■■■■□ 3.36
FAM49B-221ENST00000522361 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
FAM49B-221ENST00000522361 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
FAM49B-221ENST00000522361 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
FAM49B-221ENST00000522361 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
FAM49B-221ENST00000522361 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
FAM49B-221ENST00000522361 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
FAM49B-221ENST00000522361 PEG3Q9GZU2 1588 aa35.63■■■■□ 3.29
FAM49B-221ENST00000522361 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
FAM49B-221ENST00000522361 NESP48681 1621 aa35.43■■■■□ 3.26
FAM49B-221ENST00000522361 WIZO95785 1651 aa35.32■■■■□ 3.24
FAM49B-221ENST00000522361 CUX2O14529 1486 aa35.24■■■■□ 3.23
FAM49B-221ENST00000522361 LAMC3Q9Y6N6 1575 aa35.19■■■■□ 3.22
FAM49B-221ENST00000522361 RSF1Q96T23 1441 aaPredicted RBP35.1■■■■□ 3.21
FAM49B-221ENST00000522361 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
FAM49B-221ENST00000522361 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
FAM49B-221ENST00000522361 KIF21AQ7Z4S6 1674 aa34.97■■■■□ 3.19
FAM49B-221ENST00000522361 THOC2Q8NI27 1593 aaKnown RBP34.93■■■■□ 3.18
FAM49B-221ENST00000522361 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
FAM49B-221ENST00000522361 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
FAM49B-221ENST00000522361 MRC2Q9UBG0 1479 aa34.68■■■■□ 3.14
FAM49B-221ENST00000522361 CFTRP13569 1480 aa34.65■■■■□ 3.14
FAM49B-221ENST00000522361 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
FAM49B-221ENST00000522361 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
FAM49B-221ENST00000522361 WDR62O43379 1518 aa34.54■■■■□ 3.12
FAM49B-221ENST00000522361 CCDC88BA6NC98 1476 aa34.5■■■■□ 3.11
FAM49B-221ENST00000522361 PRDM2Q13029 1718 aa34.32■■■■□ 3.08
FAM49B-221ENST00000522361 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
FAM49B-221ENST00000522361 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
FAM49B-221ENST00000522361 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
FAM49B-221ENST00000522361 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
FAM49B-221ENST00000522361 IFT140Q96RY7 1462 aa33.9■■■■□ 3.02
FAM49B-221ENST00000522361 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
FAM49B-221ENST00000522361 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
FAM49B-221ENST00000522361 OSCARQ8IYS5 282 aa33.79■■■■□ 3
FAM49B-221ENST00000522361 POLA1P09884 1462 aaPredicted RBP33.66■■■□□ 2.98
FAM49B-221ENST00000522361 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
FAM49B-221ENST00000522361 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
FAM49B-221ENST00000522361 TARBP1Q13395 1621 aaKnown RBP33.63■■■□□ 2.97
FAM49B-221ENST00000522361 AQRO60306 1485 aaKnown RBP eCLIP33.6■■■□□ 2.97
FAM49B-221ENST00000522361 RAD54L2Q9Y4B4 1467 aa33.58■■■□□ 2.97
FAM49B-221ENST00000522361 SOGA1O94964 1423 aa33.56■■■□□ 2.96
FAM49B-221ENST00000522361 CUX1P39880 1505 aa33.53■■■□□ 2.96
FAM49B-221ENST00000522361 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
FAM49B-221ENST00000522361 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
FAM49B-221ENST00000522361 FBLN2P98095 1184 aa33.44■■■□□ 2.94
FAM49B-221ENST00000522361 CHD1O14646 1710 aa33.36■■■□□ 2.93
FAM49B-221ENST00000522361 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
FAM49B-221ENST00000522361 SNAPC4Q5SXM2 1469 aa33.26■■■□□ 2.92
FAM49B-221ENST00000522361 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
FAM49B-221ENST00000522361 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
FAM49B-221ENST00000522361 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
FAM49B-221ENST00000522361 GRIN2BQ13224 1484 aa33.2■■■□□ 2.91
FAM49B-221ENST00000522361 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
FAM49B-221ENST00000522361 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
FAM49B-221ENST00000522361 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
FAM49B-221ENST00000522361 MAGI1Q96QZ7 1491 aaPredicted RBP33.14■■■□□ 2.9
FAM49B-221ENST00000522361 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
FAM49B-221ENST00000522361 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
FAM49B-221ENST00000522361 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
FAM49B-221ENST00000522361 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
FAM49B-221ENST00000522361 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
FAM49B-221ENST00000522361 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
FAM49B-221ENST00000522361 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
FAM49B-221ENST00000522361 CYB5RLQ6IPT4 315 aa33.03■■■□□ 2.88
FAM49B-221ENST00000522361 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
FAM49B-221ENST00000522361 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
FAM49B-221ENST00000522361 ARAP1Q96P48 1450 aa32.87■■■□□ 2.85
FAM49B-221ENST00000522361 ADAMTS12P58397 1594 aa32.78■■■□□ 2.84
FAM49B-221ENST00000522361 GRIN2AQ12879 1464 aa32.77■■■□□ 2.84
FAM49B-221ENST00000522361 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
FAM49B-221ENST00000522361 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
FAM49B-221ENST00000522361 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
FAM49B-221ENST00000522361 TRHP20396 242 aaPredicted RBP32.61■■■□□ 2.81
FAM49B-221ENST00000522361 NUP160Q12769 1436 aa32.6■■■□□ 2.81
FAM49B-221ENST00000522361 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
FAM49B-221ENST00000522361 ERCC6L2Q5T890 1561 aa32.49■■■□□ 2.79
FAM49B-221ENST00000522361 IGF1RP08069 1367 aa32.41■■■□□ 2.78
FAM49B-221ENST00000522361 SHROOM2Q13796 1616 aa32.4■■■□□ 2.78
FAM49B-221ENST00000522361 JPH4Q96JJ6 628 aa32.36■■■□□ 2.77
FAM49B-221ENST00000522361 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms