RNA–Protein interactions for RNA: ENST00000522208.6

RNF130-207, Transcript of ring finger protein 130, humanhuman

TSL 5 BASIC

Gene RNF130, Length 9,945 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-207ENST00000522208 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
RNF130-207ENST00000522208 MYT1Q01538 1121 aa18.8■□□□□ 0.6
RNF130-207ENST00000522208 CCER1Q8TC90 406 aaPredicted RBP18.08■□□□□ 0.49
RNF130-207ENST00000522208 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
RNF130-207ENST00000522208 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
RNF130-207ENST00000522208 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
RNF130-207ENST00000522208 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
RNF130-207ENST00000522208 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
RNF130-207ENST00000522208 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
RNF130-207ENST00000522208 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
RNF130-207ENST00000522208 NEFLP07196 543 aa17.44■□□□□ 0.38
RNF130-207ENST00000522208 APLP2Q06481 763 aa17.38■□□□□ 0.37
RNF130-207ENST00000522208 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
RNF130-207ENST00000522208 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
RNF130-207ENST00000522208 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
RNF130-207ENST00000522208 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
RNF130-207ENST00000522208 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
RNF130-207ENST00000522208 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
RNF130-207ENST00000522208 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
RNF130-207ENST00000522208 HRCP23327 699 aa16.73■□□□□ 0.27
RNF130-207ENST00000522208 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
RNF130-207ENST00000522208 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
RNF130-207ENST00000522208 GLIPR1L2Q4G1C9 344 aa16.54■□□□□ 0.24
RNF130-207ENST00000522208 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
RNF130-207ENST00000522208 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
RNF130-207ENST00000522208 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
RNF130-207ENST00000522208 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
RNF130-207ENST00000522208 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
RNF130-207ENST00000522208 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
RNF130-207ENST00000522208 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
RNF130-207ENST00000522208 EIF5BO60841 1220 aaKnown RBP16.22■□□□□ 0.19
RNF130-207ENST00000522208 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
RNF130-207ENST00000522208 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
RNF130-207ENST00000522208 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
RNF130-207ENST00000522208 ANP32BQ92688 251 aaKnown RBP16.06■□□□□ 0.16
RNF130-207ENST00000522208 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
RNF130-207ENST00000522208 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
RNF130-207ENST00000522208 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
RNF130-207ENST00000522208 BCANQ96GW7 911 aa15.95■□□□□ 0.14
RNF130-207ENST00000522208 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
RNF130-207ENST00000522208 ANP32CO43423 234 aa15.84■□□□□ 0.13
RNF130-207ENST00000522208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
RNF130-207ENST00000522208 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
RNF130-207ENST00000522208 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
RNF130-207ENST00000522208 ITGAEP38570 1179 aa15.75■□□□□ 0.11
RNF130-207ENST00000522208 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
RNF130-207ENST00000522208 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
RNF130-207ENST00000522208 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
RNF130-207ENST00000522208 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
RNF130-207ENST00000522208 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
RNF130-207ENST00000522208 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
RNF130-207ENST00000522208 NBR1Q14596 966 aa15.59■□□□□ 0.09
RNF130-207ENST00000522208 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
RNF130-207ENST00000522208 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
RNF130-207ENST00000522208 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
RNF130-207ENST00000522208 TRIM44Q96DX7 344 aaPredicted RBP15.55■□□□□ 0.08
RNF130-207ENST00000522208 FKBP8Q14318 412 aa15.52■□□□□ 0.08
RNF130-207ENST00000522208 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.08
RNF130-207ENST00000522208 CDK11BP21127 795 aaKnown RBP15.51■□□□□ 0.07
RNF130-207ENST00000522208 NCLP19338 710 aaKnown RBP15.48■□□□□ 0.07
RNF130-207ENST00000522208 NEFMP07197 916 aa15.42■□□□□ 0.06
RNF130-207ENST00000522208 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
RNF130-207ENST00000522208 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
RNF130-207ENST00000522208 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
RNF130-207ENST00000522208 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
RNF130-207ENST00000522208 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
RNF130-207ENST00000522208 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
RNF130-207ENST00000522208 BECN1Q14457 450 aa15.35■□□□□ 0.05
RNF130-207ENST00000522208 ARXQ96QS3 562 aa15.33■□□□□ 0.04
RNF130-207ENST00000522208 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
RNF130-207ENST00000522208 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
RNF130-207ENST00000522208 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
RNF130-207ENST00000522208 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
RNF130-207ENST00000522208 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.04
RNF130-207ENST00000522208 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.03
RNF130-207ENST00000522208 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
RNF130-207ENST00000522208 ZNF326Q5BKZ1 582 aaKnown RBP15.22■□□□□ 0.03
RNF130-207ENST00000522208 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
RNF130-207ENST00000522208 DNTTIP2Q5QJE6 756 aaKnown RBP15.2■□□□□ 0.02
RNF130-207ENST00000522208 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
RNF130-207ENST00000522208 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
RNF130-207ENST00000522208 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
RNF130-207ENST00000522208 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
RNF130-207ENST00000522208 TONSLQ96HA7 1378 aa15.1■□□□□ 0.01
RNF130-207ENST00000522208 L1TD1Q5T7N2 865 aaKnown RBP15.08■□□□□ 0
RNF130-207ENST00000522208 MYH16Q9H6N6 1097 aa15.06■□□□□ 0
RNF130-207ENST00000522208 GOLGA6L6A8MZA4 724 aa15.05■□□□□ -0
RNF130-207ENST00000522208 ZRSR1Q15695 479 aaKnown RBP15.05■□□□□ -0
RNF130-207ENST00000522208 FAM9BQ8IZU0 186 aa15.05■□□□□ -0
RNF130-207ENST00000522208 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
RNF130-207ENST00000522208 NRDCO43847 1150 aa15.03■□□□□ -0
RNF130-207ENST00000522208 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
RNF130-207ENST00000522208 MSNP26038 577 aaKnown RBP15□□□□□ -0.01
RNF130-207ENST00000522208 TMC1Q8TDI8 760 aa15□□□□□ -0.01
RNF130-207ENST00000522208 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
RNF130-207ENST00000522208 TNNT3P45378 269 aaPredicted RBP14.95□□□□□ -0.02
RNF130-207ENST00000522208 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
RNF130-207ENST00000522208 MIER1Q8N108 512 aa14.92□□□□□ -0.02
RNF130-207ENST00000522208 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
RNF130-207ENST00000522208 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms