RNA–Protein interactions for RNA: ENST00000522166.1

CHCHD7-213, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, humanhuman

TSL 2

Gene CHCHD7, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7-213ENST00000522166 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
CHCHD7-213ENST00000522166 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
CHCHD7-213ENST00000522166 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
CHCHD7-213ENST00000522166 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.92
CHCHD7-213ENST00000522166 HRCP23327 699 aa20.7■□□□□ 0.9
CHCHD7-213ENST00000522166 PPARGC1BQ86YN6 1023 aaKnown RBP20.61■□□□□ 0.89
CHCHD7-213ENST00000522166 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
CHCHD7-213ENST00000522166 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
CHCHD7-213ENST00000522166 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
CHCHD7-213ENST00000522166 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
CHCHD7-213ENST00000522166 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
CHCHD7-213ENST00000522166 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.77
CHCHD7-213ENST00000522166 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
CHCHD7-213ENST00000522166 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
CHCHD7-213ENST00000522166 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
CHCHD7-213ENST00000522166 MYT1Q01538 1121 aa19.5■□□□□ 0.71
CHCHD7-213ENST00000522166 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
CHCHD7-213ENST00000522166 ABCC9O60706 1549 aa19.42■□□□□ 0.7
CHCHD7-213ENST00000522166 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
CHCHD7-213ENST00000522166 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
CHCHD7-213ENST00000522166 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
CHCHD7-213ENST00000522166 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
CHCHD7-213ENST00000522166 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
CHCHD7-213ENST00000522166 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
CHCHD7-213ENST00000522166 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
CHCHD7-213ENST00000522166 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
CHCHD7-213ENST00000522166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
CHCHD7-213ENST00000522166 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
CHCHD7-213ENST00000522166 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
CHCHD7-213ENST00000522166 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
CHCHD7-213ENST00000522166 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
CHCHD7-213ENST00000522166 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
CHCHD7-213ENST00000522166 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
CHCHD7-213ENST00000522166 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
CHCHD7-213ENST00000522166 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
CHCHD7-213ENST00000522166 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
CHCHD7-213ENST00000522166 RANGAP1P46060 587 aaPredicted RBP18.61■□□□□ 0.57
CHCHD7-213ENST00000522166 BCL11AQ9H165 835 aa18.57■□□□□ 0.56
CHCHD7-213ENST00000522166 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
CHCHD7-213ENST00000522166 WIZO95785 1651 aa18.38■□□□□ 0.53
CHCHD7-213ENST00000522166 MIER1Q8N108 512 aa18.34■□□□□ 0.53
CHCHD7-213ENST00000522166 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
CHCHD7-213ENST00000522166 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
CHCHD7-213ENST00000522166 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
CHCHD7-213ENST00000522166 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
CHCHD7-213ENST00000522166 NACADO15069 1562 aa18.24■□□□□ 0.51
CHCHD7-213ENST00000522166 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
CHCHD7-213ENST00000522166 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
CHCHD7-213ENST00000522166 CEP162Q5TB80 1403 aa18.14■□□□□ 0.5
CHCHD7-213ENST00000522166 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
CHCHD7-213ENST00000522166 SUPT16HQ9Y5B9 1047 aaKnown RBP18.12■□□□□ 0.49
CHCHD7-213ENST00000522166 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
CHCHD7-213ENST00000522166 SOGA1O94964 1423 aa18.08■□□□□ 0.48
CHCHD7-213ENST00000522166 BCANQ96GW7 911 aa18.04■□□□□ 0.48
CHCHD7-213ENST00000522166 RUSC2Q8N2Y8 1516 aa18.01■□□□□ 0.47
CHCHD7-213ENST00000522166 PRKCSHP14314 528 aaPredicted RBP18.01■□□□□ 0.47
CHCHD7-213ENST00000522166 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
CHCHD7-213ENST00000522166 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
CHCHD7-213ENST00000522166 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
CHCHD7-213ENST00000522166 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
CHCHD7-213ENST00000522166 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
CHCHD7-213ENST00000522166 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.45
CHCHD7-213ENST00000522166 APLP2Q06481 763 aa17.8■□□□□ 0.44
CHCHD7-213ENST00000522166 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
CHCHD7-213ENST00000522166 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
CHCHD7-213ENST00000522166 ITGAEP38570 1179 aa17.73■□□□□ 0.43
CHCHD7-213ENST00000522166 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
CHCHD7-213ENST00000522166 ATP1B4Q9UN42 357 aaPredicted RBP17.72■□□□□ 0.43
CHCHD7-213ENST00000522166 FKBP8Q14318 412 aa17.72■□□□□ 0.43
CHCHD7-213ENST00000522166 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
CHCHD7-213ENST00000522166 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
CHCHD7-213ENST00000522166 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
CHCHD7-213ENST00000522166 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
CHCHD7-213ENST00000522166 CLIP1P30622 1438 aa17.68■□□□□ 0.42
CHCHD7-213ENST00000522166 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.42
CHCHD7-213ENST00000522166 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
CHCHD7-213ENST00000522166 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
CHCHD7-213ENST00000522166 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
CHCHD7-213ENST00000522166 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
CHCHD7-213ENST00000522166 MSH5O43196 834 aa17.57■□□□□ 0.4
CHCHD7-213ENST00000522166 KANK4Q5T7N3 995 aaPredicted RBP17.56■□□□□ 0.4
CHCHD7-213ENST00000522166 EEA1Q15075 1411 aa17.56■□□□□ 0.4
CHCHD7-213ENST00000522166 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
CHCHD7-213ENST00000522166 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
CHCHD7-213ENST00000522166 HIRIP3Q9BW71 556 aaPredicted RBP17.54■□□□□ 0.4
CHCHD7-213ENST00000522166 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
CHCHD7-213ENST00000522166 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.39
CHCHD7-213ENST00000522166 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
CHCHD7-213ENST00000522166 NEFLP07196 543 aa17.51■□□□□ 0.39
CHCHD7-213ENST00000522166 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CHCHD7-213ENST00000522166 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
CHCHD7-213ENST00000522166 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
CHCHD7-213ENST00000522166 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
CHCHD7-213ENST00000522166 KIF21BO75037 1637 aa17.41■□□□□ 0.38
CHCHD7-213ENST00000522166 DEKP35659 375 aaKnown RBP17.4■□□□□ 0.38
CHCHD7-213ENST00000522166 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
CHCHD7-213ENST00000522166 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
CHCHD7-213ENST00000522166 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
CHCHD7-213ENST00000522166 NBR1Q14596 966 aa17.34■□□□□ 0.37
CHCHD7-213ENST00000522166 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms