RNA–Protein interactions for RNA: ENST00000522100.5

TNIP1-213, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 3

Gene TNIP1, Length 877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-213ENST00000522100 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
TNIP1-213ENST00000522100 ABCC9O60706 1549 aa28.92■■■□□ 2.22
TNIP1-213ENST00000522100 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
TNIP1-213ENST00000522100 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.98
TNIP1-213ENST00000522100 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
TNIP1-213ENST00000522100 NACADO15069 1562 aa27.17■■□□□ 1.94
TNIP1-213ENST00000522100 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
TNIP1-213ENST00000522100 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
TNIP1-213ENST00000522100 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
TNIP1-213ENST00000522100 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
TNIP1-213ENST00000522100 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
TNIP1-213ENST00000522100 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
TNIP1-213ENST00000522100 DCAF1Q9Y4B6 1507 aa26.32■■□□□ 1.8
TNIP1-213ENST00000522100 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
TNIP1-213ENST00000522100 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
TNIP1-213ENST00000522100 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
TNIP1-213ENST00000522100 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
TNIP1-213ENST00000522100 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
TNIP1-213ENST00000522100 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
TNIP1-213ENST00000522100 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
TNIP1-213ENST00000522100 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
TNIP1-213ENST00000522100 CUX2O14529 1486 aa25■■□□□ 1.59
TNIP1-213ENST00000522100 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
TNIP1-213ENST00000522100 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
TNIP1-213ENST00000522100 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
TNIP1-213ENST00000522100 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
TNIP1-213ENST00000522100 NESP48681 1621 aa24.79■■□□□ 1.56
TNIP1-213ENST00000522100 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
TNIP1-213ENST00000522100 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
TNIP1-213ENST00000522100 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
TNIP1-213ENST00000522100 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
TNIP1-213ENST00000522100 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
TNIP1-213ENST00000522100 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
TNIP1-213ENST00000522100 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
TNIP1-213ENST00000522100 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
TNIP1-213ENST00000522100 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
TNIP1-213ENST00000522100 WIZO95785 1651 aa24.24■■□□□ 1.47
TNIP1-213ENST00000522100 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
TNIP1-213ENST00000522100 WDR62O43379 1518 aa24.18■■□□□ 1.46
TNIP1-213ENST00000522100 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
TNIP1-213ENST00000522100 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
TNIP1-213ENST00000522100 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
TNIP1-213ENST00000522100 CFTRP13569 1480 aa24.01■■□□□ 1.43
TNIP1-213ENST00000522100 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
TNIP1-213ENST00000522100 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
TNIP1-213ENST00000522100 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
TNIP1-213ENST00000522100 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
TNIP1-213ENST00000522100 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
TNIP1-213ENST00000522100 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
TNIP1-213ENST00000522100 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
TNIP1-213ENST00000522100 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
TNIP1-213ENST00000522100 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
TNIP1-213ENST00000522100 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
TNIP1-213ENST00000522100 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
TNIP1-213ENST00000522100 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
TNIP1-213ENST00000522100 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
TNIP1-213ENST00000522100 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
TNIP1-213ENST00000522100 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
TNIP1-213ENST00000522100 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
TNIP1-213ENST00000522100 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.349e-7■■■■□ 23.6
TNIP1-213ENST00000522100 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
TNIP1-213ENST00000522100 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
TNIP1-213ENST00000522100 CYB5RLQ6IPT4 315 aa23.3■■□□□ 1.32
TNIP1-213ENST00000522100 CHD1O14646 1710 aa23.3■■□□□ 1.32
TNIP1-213ENST00000522100 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
TNIP1-213ENST00000522100 FBLN2P98095 1184 aa23.25■■□□□ 1.31
TNIP1-213ENST00000522100 SOGA1O94964 1423 aa23.22■■□□□ 1.31
TNIP1-213ENST00000522100 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
TNIP1-213ENST00000522100 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
TNIP1-213ENST00000522100 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
TNIP1-213ENST00000522100 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
TNIP1-213ENST00000522100 CUX1P39880 1505 aa23.11■■□□□ 1.29
TNIP1-213ENST00000522100 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
TNIP1-213ENST00000522100 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
TNIP1-213ENST00000522100 CLASP1Q7Z460 1538 aa23.07■■□□□ 1.28
TNIP1-213ENST00000522100 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
TNIP1-213ENST00000522100 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
TNIP1-213ENST00000522100 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
TNIP1-213ENST00000522100 SYNJ1O43426 1573 aa23■■□□□ 1.27
TNIP1-213ENST00000522100 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
TNIP1-213ENST00000522100 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
TNIP1-213ENST00000522100 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
TNIP1-213ENST00000522100 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
TNIP1-213ENST00000522100 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
TNIP1-213ENST00000522100 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
TNIP1-213ENST00000522100 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
TNIP1-213ENST00000522100 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
TNIP1-213ENST00000522100 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
TNIP1-213ENST00000522100 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
TNIP1-213ENST00000522100 NUP160Q12769 1436 aa22.69■■□□□ 1.22
TNIP1-213ENST00000522100 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
TNIP1-213ENST00000522100 TOP2BQ02880 1626 aa22.64■■□□□ 1.22
TNIP1-213ENST00000522100 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
TNIP1-213ENST00000522100 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
TNIP1-213ENST00000522100 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
TNIP1-213ENST00000522100 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
TNIP1-213ENST00000522100 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
TNIP1-213ENST00000522100 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
TNIP1-213ENST00000522100 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
TNIP1-213ENST00000522100 KIF13AQ9H1H9 1805 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms