RNA–Protein interactions for RNA: ENST00000521995.1

ITGB2-218, Transcript of integrin subunit beta 2, humanhuman

TSL 4

Gene ITGB2, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-218ENST00000521995 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
ITGB2-218ENST00000521995 CCDC180Q9P1Z9 1646 aa34.34■■■■□ 3.09
ITGB2-218ENST00000521995 ABCC9O60706 1549 aa33.74■■■□□ 2.99
ITGB2-218ENST00000521995 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
ITGB2-218ENST00000521995 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
ITGB2-218ENST00000521995 NACADO15069 1562 aa32.29■■■□□ 2.76
ITGB2-218ENST00000521995 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
ITGB2-218ENST00000521995 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
ITGB2-218ENST00000521995 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
ITGB2-218ENST00000521995 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
ITGB2-218ENST00000521995 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
ITGB2-218ENST00000521995 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
ITGB2-218ENST00000521995 BICRAQ9NZM4 1560 aa31.43■■■□□ 2.62
ITGB2-218ENST00000521995 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
ITGB2-218ENST00000521995 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
ITGB2-218ENST00000521995 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
ITGB2-218ENST00000521995 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
ITGB2-218ENST00000521995 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
ITGB2-218ENST00000521995 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
ITGB2-218ENST00000521995 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
ITGB2-218ENST00000521995 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
ITGB2-218ENST00000521995 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
ITGB2-218ENST00000521995 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
ITGB2-218ENST00000521995 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
ITGB2-218ENST00000521995 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
ITGB2-218ENST00000521995 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
ITGB2-218ENST00000521995 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
ITGB2-218ENST00000521995 WIZO95785 1651 aa29.56■■■□□ 2.32
ITGB2-218ENST00000521995 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
ITGB2-218ENST00000521995 NESP48681 1621 aa29.21■■■□□ 2.27
ITGB2-218ENST00000521995 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
ITGB2-218ENST00000521995 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
ITGB2-218ENST00000521995 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
ITGB2-218ENST00000521995 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
ITGB2-218ENST00000521995 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
ITGB2-218ENST00000521995 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
ITGB2-218ENST00000521995 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
ITGB2-218ENST00000521995 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
ITGB2-218ENST00000521995 CFTRP13569 1480 aa28.78■■■□□ 2.2
ITGB2-218ENST00000521995 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
ITGB2-218ENST00000521995 CUX2O14529 1486 aa28.66■■■□□ 2.18
ITGB2-218ENST00000521995 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
ITGB2-218ENST00000521995 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
ITGB2-218ENST00000521995 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
ITGB2-218ENST00000521995 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
ITGB2-218ENST00000521995 WDR62O43379 1518 aa28.46■■■□□ 2.15
ITGB2-218ENST00000521995 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
ITGB2-218ENST00000521995 TOPBP1Q92547 1522 aa28.2■■■□□ 2.1
ITGB2-218ENST00000521995 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
ITGB2-218ENST00000521995 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
ITGB2-218ENST00000521995 CUX1P39880 1505 aa28.01■■■□□ 2.07
ITGB2-218ENST00000521995 IFT140Q96RY7 1462 aa28■■■□□ 2.07
ITGB2-218ENST00000521995 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
ITGB2-218ENST00000521995 ZNF608Q9ULD9 1512 aaPredicted RBP27.94■■■□□ 2.06
ITGB2-218ENST00000521995 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
ITGB2-218ENST00000521995 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
ITGB2-218ENST00000521995 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
ITGB2-218ENST00000521995 SOGA1O94964 1423 aa27.85■■■□□ 2.05
ITGB2-218ENST00000521995 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
ITGB2-218ENST00000521995 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
ITGB2-218ENST00000521995 EIF4G3O43432 1585 aaKnown RBP27.81■■■□□ 2.04
ITGB2-218ENST00000521995 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.04
ITGB2-218ENST00000521995 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
ITGB2-218ENST00000521995 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
ITGB2-218ENST00000521995 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
ITGB2-218ENST00000521995 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
ITGB2-218ENST00000521995 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
ITGB2-218ENST00000521995 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
ITGB2-218ENST00000521995 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
ITGB2-218ENST00000521995 OSCARQ8IYS5 282 aa27.52■■■□□ 2
ITGB2-218ENST00000521995 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
ITGB2-218ENST00000521995 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
ITGB2-218ENST00000521995 ABCA5Q8WWZ7 1642 aa27.5■■□□□ 1.99
ITGB2-218ENST00000521995 FBLN2P98095 1184 aa27.49■■□□□ 1.99
ITGB2-218ENST00000521995 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
ITGB2-218ENST00000521995 CHD1O14646 1710 aa27.47■■□□□ 1.99
ITGB2-218ENST00000521995 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
ITGB2-218ENST00000521995 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
ITGB2-218ENST00000521995 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
ITGB2-218ENST00000521995 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
ITGB2-218ENST00000521995 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
ITGB2-218ENST00000521995 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
ITGB2-218ENST00000521995 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
ITGB2-218ENST00000521995 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
ITGB2-218ENST00000521995 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
ITGB2-218ENST00000521995 CLASP1Q7Z460 1538 aa27.13■■□□□ 1.93
ITGB2-218ENST00000521995 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
ITGB2-218ENST00000521995 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
ITGB2-218ENST00000521995 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
ITGB2-218ENST00000521995 IGF1RP08069 1367 aa27.12■■□□□ 1.93
ITGB2-218ENST00000521995 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
ITGB2-218ENST00000521995 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
ITGB2-218ENST00000521995 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
ITGB2-218ENST00000521995 NUP160Q12769 1436 aa27.01■■□□□ 1.91
ITGB2-218ENST00000521995 CUL7Q14999 1698 aa27.01■■□□□ 1.91
ITGB2-218ENST00000521995 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
ITGB2-218ENST00000521995 ARAP1Q96P48 1450 aa26.9■■□□□ 1.9
ITGB2-218ENST00000521995 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
ITGB2-218ENST00000521995 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
ITGB2-218ENST00000521995 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms