RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-238ENST00000521986 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
PTK2-238ENST00000521986 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
PTK2-238ENST00000521986 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
PTK2-238ENST00000521986 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
PTK2-238ENST00000521986 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
PTK2-238ENST00000521986 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
PTK2-238ENST00000521986 ABCC9O60706 1549 aa14.38□□□□□ -0.11
PTK2-238ENST00000521986 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
PTK2-238ENST00000521986 HRCP23327 699 aa14.23□□□□□ -0.13
PTK2-238ENST00000521986 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
PTK2-238ENST00000521986 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
PTK2-238ENST00000521986 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
PTK2-238ENST00000521986 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
PTK2-238ENST00000521986 NACADO15069 1562 aa13.93□□□□□ -0.18
PTK2-238ENST00000521986 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
PTK2-238ENST00000521986 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
PTK2-238ENST00000521986 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
PTK2-238ENST00000521986 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
PTK2-238ENST00000521986 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTK2-238ENST00000521986 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
PTK2-238ENST00000521986 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
PTK2-238ENST00000521986 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
PTK2-238ENST00000521986 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
PTK2-238ENST00000521986 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
PTK2-238ENST00000521986 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
PTK2-238ENST00000521986 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
PTK2-238ENST00000521986 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
PTK2-238ENST00000521986 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
PTK2-238ENST00000521986 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
PTK2-238ENST00000521986 WIZO95785 1651 aa13.4□□□□□ -0.27
PTK2-238ENST00000521986 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
PTK2-238ENST00000521986 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
PTK2-238ENST00000521986 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
PTK2-238ENST00000521986 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
PTK2-238ENST00000521986 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
PTK2-238ENST00000521986 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
PTK2-238ENST00000521986 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
PTK2-238ENST00000521986 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
PTK2-238ENST00000521986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
PTK2-238ENST00000521986 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
PTK2-238ENST00000521986 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
PTK2-238ENST00000521986 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
PTK2-238ENST00000521986 CCER1Q8TC90 406 aaPredicted RBP13.06□□□□□ -0.32
PTK2-238ENST00000521986 SOGA1O94964 1423 aa13.02□□□□□ -0.32
PTK2-238ENST00000521986 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
PTK2-238ENST00000521986 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
PTK2-238ENST00000521986 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
PTK2-238ENST00000521986 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
PTK2-238ENST00000521986 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
PTK2-238ENST00000521986 GTF3C3Q9Y5Q9 886 aa12.97□□□□□ -0.33
PTK2-238ENST00000521986 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
PTK2-238ENST00000521986 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
PTK2-238ENST00000521986 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
PTK2-238ENST00000521986 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
PTK2-238ENST00000521986 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
PTK2-238ENST00000521986 CC2D2AQ9P2K1 1620 aa12.9□□□□□ -0.34
PTK2-238ENST00000521986 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
PTK2-238ENST00000521986 EEA1Q15075 1411 aa12.88□□□□□ -0.35
PTK2-238ENST00000521986 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
PTK2-238ENST00000521986 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
PTK2-238ENST00000521986 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
PTK2-238ENST00000521986 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
PTK2-238ENST00000521986 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
PTK2-238ENST00000521986 MYT1Q01538 1121 aa12.82□□□□□ -0.36
PTK2-238ENST00000521986 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
PTK2-238ENST00000521986 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
PTK2-238ENST00000521986 KIF21BO75037 1637 aa12.75□□□□□ -0.37
PTK2-238ENST00000521986 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
PTK2-238ENST00000521986 CLIP1P30622 1438 aa12.71□□□□□ -0.37
PTK2-238ENST00000521986 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
PTK2-238ENST00000521986 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
PTK2-238ENST00000521986 MIER1Q8N108 512 aa12.67□□□□□ -0.38
PTK2-238ENST00000521986 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
PTK2-238ENST00000521986 CFTRP13569 1480 aa12.67□□□□□ -0.38
PTK2-238ENST00000521986 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
PTK2-238ENST00000521986 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
PTK2-238ENST00000521986 NESP48681 1621 aa12.63□□□□□ -0.39
PTK2-238ENST00000521986 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
PTK2-238ENST00000521986 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.4
PTK2-238ENST00000521986 APLP2Q06481 763 aa12.56□□□□□ -0.4
PTK2-238ENST00000521986 ARAP1Q96P48 1450 aa12.52□□□□□ -0.4
PTK2-238ENST00000521986 PRXQ9BXM0 1461 aa12.52□□□□□ -0.4
PTK2-238ENST00000521986 CUX1P39880 1505 aa12.52□□□□□ -0.41
PTK2-238ENST00000521986 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
PTK2-238ENST00000521986 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
PTK2-238ENST00000521986 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
PTK2-238ENST00000521986 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
PTK2-238ENST00000521986 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
PTK2-238ENST00000521986 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
PTK2-238ENST00000521986 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
PTK2-238ENST00000521986 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.43
PTK2-238ENST00000521986 ARHGAP35Q9NRY4 1499 aa12.39□□□□□ -0.43
PTK2-238ENST00000521986 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
PTK2-238ENST00000521986 FGD5Q6ZNL6 1462 aa12.38□□□□□ -0.43
PTK2-238ENST00000521986 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
PTK2-238ENST00000521986 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
PTK2-238ENST00000521986 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
PTK2-238ENST00000521986 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
PTK2-238ENST00000521986 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
PTK2-238ENST00000521986 CUX2O14529 1486 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms