RNA–Protein interactions for RNA: ENST00000521825.1

TSNARE1-207, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 346 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-207ENST00000521825 NISCHQ9Y2I1 1504 aa43.71■■■■■ 4.59
TSNARE1-207ENST00000521825 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
TSNARE1-207ENST00000521825 ABCC9O60706 1549 aa38.38■■■■□ 3.73
TSNARE1-207ENST00000521825 RB1CC1Q8TDY2 1594 aa36.82■■■■□ 3.48
TSNARE1-207ENST00000521825 NACADO15069 1562 aa36.7■■■■□ 3.47
TSNARE1-207ENST00000521825 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
TSNARE1-207ENST00000521825 MYO15BQ96JP2 1530 aa36.41■■■■□ 3.42
TSNARE1-207ENST00000521825 ZCCHC6Q5VYS8 1495 aaKnown RBP36.36■■■■□ 3.41
TSNARE1-207ENST00000521825 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
TSNARE1-207ENST00000521825 UNC13AQ9UPW8 1703 aa36.13■■■■□ 3.37
TSNARE1-207ENST00000521825 PABPN1Q86U42 306 aaKnown RBP eCLIP35.79■■■■□ 3.32
TSNARE1-207ENST00000521825 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
TSNARE1-207ENST00000521825 SCRIBQ14160 1630 aa35.56■■■■□ 3.28
TSNARE1-207ENST00000521825 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
TSNARE1-207ENST00000521825 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
TSNARE1-207ENST00000521825 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
TSNARE1-207ENST00000521825 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
TSNARE1-207ENST00000521825 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
TSNARE1-207ENST00000521825 SMARCA4P51532 1647 aa34■■■■□ 3.03
TSNARE1-207ENST00000521825 BAZ1AQ9NRL2 1556 aaPredicted RBP33.89■■■■□ 3.02
TSNARE1-207ENST00000521825 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
TSNARE1-207ENST00000521825 ATAD2BQ9ULI0 1458 aa33.84■■■■□ 3.01
TSNARE1-207ENST00000521825 SMARCA2P51531 1590 aa33.79■■■■□ 3
TSNARE1-207ENST00000521825 HMGXB3Q12766 1538 aa33.69■■■□□ 2.98
TSNARE1-207ENST00000521825 MROH2BQ7Z745 1585 aa33.69■■■□□ 2.98
TSNARE1-207ENST00000521825 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
TSNARE1-207ENST00000521825 BAZ1BQ9UIG0 1483 aaKnown RBP33.53■■■□□ 2.96
TSNARE1-207ENST00000521825 WIZO95785 1651 aa33.36■■■□□ 2.93
TSNARE1-207ENST00000521825 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
TSNARE1-207ENST00000521825 NESP48681 1621 aa33.17■■■□□ 2.9
TSNARE1-207ENST00000521825 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
TSNARE1-207ENST00000521825 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
TSNARE1-207ENST00000521825 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
TSNARE1-207ENST00000521825 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
TSNARE1-207ENST00000521825 CUX2O14529 1486 aa32.84■■■□□ 2.85
TSNARE1-207ENST00000521825 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
TSNARE1-207ENST00000521825 PDS5BQ9NTI5 1447 aa32.77■■■□□ 2.84
TSNARE1-207ENST00000521825 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
TSNARE1-207ENST00000521825 CFTRP13569 1480 aa32.61■■■□□ 2.81
TSNARE1-207ENST00000521825 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
TSNARE1-207ENST00000521825 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
TSNARE1-207ENST00000521825 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
TSNARE1-207ENST00000521825 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
TSNARE1-207ENST00000521825 CEP164Q9UPV0 1460 aa32.45■■■□□ 2.79
TSNARE1-207ENST00000521825 WDR62O43379 1518 aa32.41■■■□□ 2.78
TSNARE1-207ENST00000521825 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
TSNARE1-207ENST00000521825 DNAJC5Q9H3Z4 198 aa32.15■■■□□ 2.74
TSNARE1-207ENST00000521825 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
TSNARE1-207ENST00000521825 TOPBP1Q92547 1522 aa31.95■■■□□ 2.7
TSNARE1-207ENST00000521825 ABCC8Q09428 1581 aa31.9■■■□□ 2.7
TSNARE1-207ENST00000521825 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
TSNARE1-207ENST00000521825 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
TSNARE1-207ENST00000521825 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.66
TSNARE1-207ENST00000521825 TARBP1Q13395 1621 aaKnown RBP31.66■■■□□ 2.66
TSNARE1-207ENST00000521825 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
TSNARE1-207ENST00000521825 CUX1P39880 1505 aa31.62■■■□□ 2.65
TSNARE1-207ENST00000521825 EIF4G3O43432 1585 aaKnown RBP31.58■■■□□ 2.65
TSNARE1-207ENST00000521825 FGD5Q6ZNL6 1462 aa31.53■■■□□ 2.64
TSNARE1-207ENST00000521825 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
TSNARE1-207ENST00000521825 SOGA1O94964 1423 aa31.49■■■□□ 2.63
TSNARE1-207ENST00000521825 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
TSNARE1-207ENST00000521825 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
TSNARE1-207ENST00000521825 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
TSNARE1-207ENST00000521825 TDRD9Q8NDG6 1382 aaKnown RBP31.35■■■□□ 2.61
TSNARE1-207ENST00000521825 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
TSNARE1-207ENST00000521825 TOP2BQ02880 1626 aa31.29■■■□□ 2.6
TSNARE1-207ENST00000521825 CHD1O14646 1710 aa31.29■■■□□ 2.6
TSNARE1-207ENST00000521825 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
TSNARE1-207ENST00000521825 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
TSNARE1-207ENST00000521825 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
TSNARE1-207ENST00000521825 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
TSNARE1-207ENST00000521825 SNAPC4Q5SXM2 1469 aa31.17■■■□□ 2.58
TSNARE1-207ENST00000521825 GRIN2BQ13224 1484 aa31.16■■■□□ 2.58
TSNARE1-207ENST00000521825 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
TSNARE1-207ENST00000521825 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.57
TSNARE1-207ENST00000521825 MAGI1Q96QZ7 1491 aaPredicted RBP31.11■■■□□ 2.57
TSNARE1-207ENST00000521825 FBLN2P98095 1184 aa31.08■■■□□ 2.57
TSNARE1-207ENST00000521825 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
TSNARE1-207ENST00000521825 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
TSNARE1-207ENST00000521825 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
TSNARE1-207ENST00000521825 SYNJ2O15056 1496 aa31■■■□□ 2.55
TSNARE1-207ENST00000521825 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
TSNARE1-207ENST00000521825 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
TSNARE1-207ENST00000521825 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
TSNARE1-207ENST00000521825 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
TSNARE1-207ENST00000521825 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
TSNARE1-207ENST00000521825 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
TSNARE1-207ENST00000521825 GRIN2AQ12879 1464 aa30.77■■■□□ 2.52
TSNARE1-207ENST00000521825 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
TSNARE1-207ENST00000521825 ARAP1Q96P48 1450 aa30.69■■■□□ 2.5
TSNARE1-207ENST00000521825 CEP170Q5SW79 1584 aa30.67■■■□□ 2.5
TSNARE1-207ENST00000521825 NUP160Q12769 1436 aa30.65■■■□□ 2.5
TSNARE1-207ENST00000521825 KIF27Q86VH2 1401 aa30.63■■■□□ 2.49
TSNARE1-207ENST00000521825 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
TSNARE1-207ENST00000521825 IGF1RP08069 1367 aa30.56■■■□□ 2.48
TSNARE1-207ENST00000521825 CUL7Q14999 1698 aa30.54■■■□□ 2.48
TSNARE1-207ENST00000521825 SHROOM2Q13796 1616 aa30.51■■■□□ 2.48
TSNARE1-207ENST00000521825 ERCC6L2Q5T890 1561 aa30.46■■■□□ 2.47
TSNARE1-207ENST00000521825 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
TSNARE1-207ENST00000521825 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms