RNA–Protein interactions for RNA: ENST00000521806.5

GPAT4-210, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 5

Gene GPAT4, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-210ENST00000521806 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
GPAT4-210ENST00000521806 ABCC9O60706 1549 aa24■■□□□ 1.43
GPAT4-210ENST00000521806 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
GPAT4-210ENST00000521806 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
GPAT4-210ENST00000521806 NACADO15069 1562 aa22.61■■□□□ 1.21
GPAT4-210ENST00000521806 DNAJC5BQ9UF47 199 aa22.56■■□□□ 1.2
GPAT4-210ENST00000521806 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
GPAT4-210ENST00000521806 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
GPAT4-210ENST00000521806 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
GPAT4-210ENST00000521806 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
GPAT4-210ENST00000521806 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
GPAT4-210ENST00000521806 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
GPAT4-210ENST00000521806 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
GPAT4-210ENST00000521806 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
GPAT4-210ENST00000521806 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
GPAT4-210ENST00000521806 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
GPAT4-210ENST00000521806 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
GPAT4-210ENST00000521806 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
GPAT4-210ENST00000521806 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
GPAT4-210ENST00000521806 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
GPAT4-210ENST00000521806 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
GPAT4-210ENST00000521806 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
GPAT4-210ENST00000521806 CUX2O14529 1486 aa20.75■□□□□ 0.91
GPAT4-210ENST00000521806 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
GPAT4-210ENST00000521806 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
GPAT4-210ENST00000521806 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
GPAT4-210ENST00000521806 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
GPAT4-210ENST00000521806 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
GPAT4-210ENST00000521806 NESP48681 1621 aa20.56■□□□□ 0.88
GPAT4-210ENST00000521806 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
GPAT4-210ENST00000521806 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
GPAT4-210ENST00000521806 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
GPAT4-210ENST00000521806 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
GPAT4-210ENST00000521806 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
GPAT4-210ENST00000521806 KIF21AQ7Z4S6 1674 aa20.31■□□□□ 0.84
GPAT4-210ENST00000521806 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
GPAT4-210ENST00000521806 WIZO95785 1651 aa20.2■□□□□ 0.82
GPAT4-210ENST00000521806 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
GPAT4-210ENST00000521806 WDR62O43379 1518 aa20.09■□□□□ 0.81
GPAT4-210ENST00000521806 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
GPAT4-210ENST00000521806 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
GPAT4-210ENST00000521806 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
GPAT4-210ENST00000521806 CFTRP13569 1480 aa19.97■□□□□ 0.79
GPAT4-210ENST00000521806 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
GPAT4-210ENST00000521806 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
GPAT4-210ENST00000521806 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
GPAT4-210ENST00000521806 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
GPAT4-210ENST00000521806 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
GPAT4-210ENST00000521806 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
GPAT4-210ENST00000521806 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
GPAT4-210ENST00000521806 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
GPAT4-210ENST00000521806 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
GPAT4-210ENST00000521806 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
GPAT4-210ENST00000521806 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
GPAT4-210ENST00000521806 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
GPAT4-210ENST00000521806 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
GPAT4-210ENST00000521806 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
GPAT4-210ENST00000521806 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
GPAT4-210ENST00000521806 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
GPAT4-210ENST00000521806 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.76e-8■■□□□ 14.2
GPAT4-210ENST00000521806 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
GPAT4-210ENST00000521806 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
GPAT4-210ENST00000521806 CHD1O14646 1710 aa19.38■□□□□ 0.69
GPAT4-210ENST00000521806 FBLN2P98095 1184 aa19.38■□□□□ 0.69
GPAT4-210ENST00000521806 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
GPAT4-210ENST00000521806 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.68
GPAT4-210ENST00000521806 SOGA1O94964 1423 aa19.33■□□□□ 0.68
GPAT4-210ENST00000521806 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
GPAT4-210ENST00000521806 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.67
GPAT4-210ENST00000521806 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
GPAT4-210ENST00000521806 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
GPAT4-210ENST00000521806 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
GPAT4-210ENST00000521806 CUX1P39880 1505 aa19.21■□□□□ 0.67
GPAT4-210ENST00000521806 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
GPAT4-210ENST00000521806 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
GPAT4-210ENST00000521806 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
GPAT4-210ENST00000521806 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
GPAT4-210ENST00000521806 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
GPAT4-210ENST00000521806 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
GPAT4-210ENST00000521806 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
GPAT4-210ENST00000521806 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
GPAT4-210ENST00000521806 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
GPAT4-210ENST00000521806 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
GPAT4-210ENST00000521806 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
GPAT4-210ENST00000521806 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
GPAT4-210ENST00000521806 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
GPAT4-210ENST00000521806 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
GPAT4-210ENST00000521806 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
GPAT4-210ENST00000521806 ADAMTS12P58397 1594 aa18.89■□□□□ 0.61
GPAT4-210ENST00000521806 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
GPAT4-210ENST00000521806 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
GPAT4-210ENST00000521806 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
GPAT4-210ENST00000521806 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
GPAT4-210ENST00000521806 NUP160Q12769 1436 aa18.83■□□□□ 0.61
GPAT4-210ENST00000521806 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
GPAT4-210ENST00000521806 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
GPAT4-210ENST00000521806 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
GPAT4-210ENST00000521806 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
GPAT4-210ENST00000521806 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
GPAT4-210ENST00000521806 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms