RNA–Protein interactions for RNA: ENST00000521514.5

ATP6V1C1-205, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V1C1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-205ENST00000521514 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
ATP6V1C1-205ENST00000521514 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
ATP6V1C1-205ENST00000521514 ABCC9O60706 1549 aa27.98■■■□□ 2.07
ATP6V1C1-205ENST00000521514 ZCCHC6Q5VYS8 1495 aaKnown RBP27.18■■□□□ 1.94
ATP6V1C1-205ENST00000521514 NACADO15069 1562 aa27.07■■□□□ 1.92
ATP6V1C1-205ENST00000521514 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
ATP6V1C1-205ENST00000521514 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
ATP6V1C1-205ENST00000521514 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
ATP6V1C1-205ENST00000521514 DCAF8L2P0C7V8 631 aa26.93■■□□□ 1.9
ATP6V1C1-205ENST00000521514 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
ATP6V1C1-205ENST00000521514 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
ATP6V1C1-205ENST00000521514 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
ATP6V1C1-205ENST00000521514 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
ATP6V1C1-205ENST00000521514 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
ATP6V1C1-205ENST00000521514 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
ATP6V1C1-205ENST00000521514 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
ATP6V1C1-205ENST00000521514 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
ATP6V1C1-205ENST00000521514 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
ATP6V1C1-205ENST00000521514 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
ATP6V1C1-205ENST00000521514 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
ATP6V1C1-205ENST00000521514 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
ATP6V1C1-205ENST00000521514 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
ATP6V1C1-205ENST00000521514 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
ATP6V1C1-205ENST00000521514 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
ATP6V1C1-205ENST00000521514 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
ATP6V1C1-205ENST00000521514 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
ATP6V1C1-205ENST00000521514 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.57
ATP6V1C1-205ENST00000521514 WIZO95785 1651 aa24.83■■□□□ 1.56
ATP6V1C1-205ENST00000521514 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
ATP6V1C1-205ENST00000521514 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
ATP6V1C1-205ENST00000521514 NESP48681 1621 aa24.31■■□□□ 1.48
ATP6V1C1-205ENST00000521514 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
ATP6V1C1-205ENST00000521514 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
ATP6V1C1-205ENST00000521514 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
ATP6V1C1-205ENST00000521514 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
ATP6V1C1-205ENST00000521514 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
ATP6V1C1-205ENST00000521514 CFTRP13569 1480 aa24.19■■□□□ 1.46
ATP6V1C1-205ENST00000521514 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
ATP6V1C1-205ENST00000521514 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
ATP6V1C1-205ENST00000521514 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
ATP6V1C1-205ENST00000521514 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
ATP6V1C1-205ENST00000521514 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
ATP6V1C1-205ENST00000521514 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
ATP6V1C1-205ENST00000521514 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.41
ATP6V1C1-205ENST00000521514 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
ATP6V1C1-205ENST00000521514 CUX2O14529 1486 aa23.81■■□□□ 1.4
ATP6V1C1-205ENST00000521514 WDR62O43379 1518 aa23.79■■□□□ 1.4
ATP6V1C1-205ENST00000521514 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
ATP6V1C1-205ENST00000521514 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
ATP6V1C1-205ENST00000521514 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
ATP6V1C1-205ENST00000521514 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
ATP6V1C1-205ENST00000521514 CUX1P39880 1505 aa23.53■■□□□ 1.36
ATP6V1C1-205ENST00000521514 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
ATP6V1C1-205ENST00000521514 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
ATP6V1C1-205ENST00000521514 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
ATP6V1C1-205ENST00000521514 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.33
ATP6V1C1-205ENST00000521514 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
ATP6V1C1-205ENST00000521514 BIVM-ERCC5R4GMW8 1640 aa23.39■■□□□ 1.33
ATP6V1C1-205ENST00000521514 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
ATP6V1C1-205ENST00000521514 TOP2BQ02880 1626 aa23.38■■□□□ 1.33
ATP6V1C1-205ENST00000521514 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
ATP6V1C1-205ENST00000521514 SOGA1O94964 1423 aa23.3■■□□□ 1.32
ATP6V1C1-205ENST00000521514 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
ATP6V1C1-205ENST00000521514 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
ATP6V1C1-205ENST00000521514 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.31
ATP6V1C1-205ENST00000521514 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
ATP6V1C1-205ENST00000521514 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
ATP6V1C1-205ENST00000521514 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
ATP6V1C1-205ENST00000521514 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
ATP6V1C1-205ENST00000521514 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
ATP6V1C1-205ENST00000521514 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
ATP6V1C1-205ENST00000521514 PBRM1Q86U86 1689 aa23■■□□□ 1.27
ATP6V1C1-205ENST00000521514 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
ATP6V1C1-205ENST00000521514 MAGI1Q96QZ7 1491 aaPredicted RBP22.95■■□□□ 1.26
ATP6V1C1-205ENST00000521514 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
ATP6V1C1-205ENST00000521514 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
ATP6V1C1-205ENST00000521514 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
ATP6V1C1-205ENST00000521514 CHD1O14646 1710 aa22.88■■□□□ 1.25
ATP6V1C1-205ENST00000521514 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
ATP6V1C1-205ENST00000521514 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
ATP6V1C1-205ENST00000521514 DNAJC5Q9H3Z4 198 aa22.85■■□□□ 1.25
ATP6V1C1-205ENST00000521514 ADAMTS12P58397 1594 aa22.85■■□□□ 1.25
ATP6V1C1-205ENST00000521514 IGF1RP08069 1367 aa22.83■■□□□ 1.24
ATP6V1C1-205ENST00000521514 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
ATP6V1C1-205ENST00000521514 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
ATP6V1C1-205ENST00000521514 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
ATP6V1C1-205ENST00000521514 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
ATP6V1C1-205ENST00000521514 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
ATP6V1C1-205ENST00000521514 FBLN2P98095 1184 aa22.73■■□□□ 1.23
ATP6V1C1-205ENST00000521514 CUL7Q14999 1698 aa22.73■■□□□ 1.23
ATP6V1C1-205ENST00000521514 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
ATP6V1C1-205ENST00000521514 NUP160Q12769 1436 aa22.67■■□□□ 1.22
ATP6V1C1-205ENST00000521514 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
ATP6V1C1-205ENST00000521514 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
ATP6V1C1-205ENST00000521514 EEA1Q15075 1411 aa22.6■■□□□ 1.21
ATP6V1C1-205ENST00000521514 PRXQ9BXM0 1461 aa22.57■■□□□ 1.2
ATP6V1C1-205ENST00000521514 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
ATP6V1C1-205ENST00000521514 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
ATP6V1C1-205ENST00000521514 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
ATP6V1C1-205ENST00000521514 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms