RNA–Protein interactions for RNA: ENST00000521423.1

TNIP1-210, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5

Gene TNIP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-210ENST00000521423 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.67
TNIP1-210ENST00000521423 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
TNIP1-210ENST00000521423 ABCC9O60706 1549 aa22.38■■□□□ 1.17
TNIP1-210ENST00000521423 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
TNIP1-210ENST00000521423 NACADO15069 1562 aa21.48■■□□□ 1.03
TNIP1-210ENST00000521423 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
TNIP1-210ENST00000521423 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
TNIP1-210ENST00000521423 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
TNIP1-210ENST00000521423 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
TNIP1-210ENST00000521423 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
TNIP1-210ENST00000521423 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
TNIP1-210ENST00000521423 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.92
TNIP1-210ENST00000521423 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
TNIP1-210ENST00000521423 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
TNIP1-210ENST00000521423 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
TNIP1-210ENST00000521423 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
TNIP1-210ENST00000521423 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
TNIP1-210ENST00000521423 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
TNIP1-210ENST00000521423 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
TNIP1-210ENST00000521423 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
TNIP1-210ENST00000521423 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
TNIP1-210ENST00000521423 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
TNIP1-210ENST00000521423 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
TNIP1-210ENST00000521423 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
TNIP1-210ENST00000521423 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
TNIP1-210ENST00000521423 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
TNIP1-210ENST00000521423 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
TNIP1-210ENST00000521423 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
TNIP1-210ENST00000521423 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
TNIP1-210ENST00000521423 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
TNIP1-210ENST00000521423 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
TNIP1-210ENST00000521423 WIZO95785 1651 aa19.32■□□□□ 0.68
TNIP1-210ENST00000521423 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
TNIP1-210ENST00000521423 NESP48681 1621 aa19.28■□□□□ 0.68
TNIP1-210ENST00000521423 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
TNIP1-210ENST00000521423 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
TNIP1-210ENST00000521423 CUX2O14529 1486 aa19.27■□□□□ 0.67
TNIP1-210ENST00000521423 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
TNIP1-210ENST00000521423 CFTRP13569 1480 aa19.09■□□□□ 0.65
TNIP1-210ENST00000521423 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
TNIP1-210ENST00000521423 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
TNIP1-210ENST00000521423 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
TNIP1-210ENST00000521423 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
TNIP1-210ENST00000521423 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
TNIP1-210ENST00000521423 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
TNIP1-210ENST00000521423 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
TNIP1-210ENST00000521423 WDR62O43379 1518 aa18.89■□□□□ 0.61
TNIP1-210ENST00000521423 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
TNIP1-210ENST00000521423 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
TNIP1-210ENST00000521423 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
TNIP1-210ENST00000521423 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
TNIP1-210ENST00000521423 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
TNIP1-210ENST00000521423 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
TNIP1-210ENST00000521423 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
TNIP1-210ENST00000521423 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
TNIP1-210ENST00000521423 SOGA1O94964 1423 aa18.48■□□□□ 0.55
TNIP1-210ENST00000521423 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
TNIP1-210ENST00000521423 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
TNIP1-210ENST00000521423 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
TNIP1-210ENST00000521423 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.538e-7■■■■■ 27.6
TNIP1-210ENST00000521423 CUX1P39880 1505 aa18.39■□□□□ 0.53
TNIP1-210ENST00000521423 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
TNIP1-210ENST00000521423 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
TNIP1-210ENST00000521423 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
TNIP1-210ENST00000521423 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
TNIP1-210ENST00000521423 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
TNIP1-210ENST00000521423 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
TNIP1-210ENST00000521423 FBLN2P98095 1184 aa18.28■□□□□ 0.52
TNIP1-210ENST00000521423 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
TNIP1-210ENST00000521423 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
TNIP1-210ENST00000521423 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
TNIP1-210ENST00000521423 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
TNIP1-210ENST00000521423 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
TNIP1-210ENST00000521423 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
TNIP1-210ENST00000521423 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
TNIP1-210ENST00000521423 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
TNIP1-210ENST00000521423 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
TNIP1-210ENST00000521423 SYNJ2O15056 1496 aa18.14■□□□□ 0.5
TNIP1-210ENST00000521423 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
TNIP1-210ENST00000521423 CHD1O14646 1710 aa18.09■□□□□ 0.49
TNIP1-210ENST00000521423 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
TNIP1-210ENST00000521423 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
TNIP1-210ENST00000521423 RIMBP3CA6NJZ7 1639 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 RIMBP3BA6NNM3 1639 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 RIMBP3Q9UFD9 1639 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
TNIP1-210ENST00000521423 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
TNIP1-210ENST00000521423 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
TNIP1-210ENST00000521423 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
TNIP1-210ENST00000521423 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
TNIP1-210ENST00000521423 IGF1RP08069 1367 aa17.92■□□□□ 0.46
TNIP1-210ENST00000521423 NUP160Q12769 1436 aa17.92■□□□□ 0.46
TNIP1-210ENST00000521423 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
TNIP1-210ENST00000521423 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
TNIP1-210ENST00000521423 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
TNIP1-210ENST00000521423 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
TNIP1-210ENST00000521423 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms