RNA–Protein interactions for RNA: ENST00000521344.1

PCMTD1-206, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3 BASIC

Gene PCMTD1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-206ENST00000521344 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
PCMTD1-206ENST00000521344 CCDC180Q9P1Z9 1646 aa36.14■■■■□ 3.38
PCMTD1-206ENST00000521344 ABCC9O60706 1549 aa34.84■■■■□ 3.17
PCMTD1-206ENST00000521344 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
PCMTD1-206ENST00000521344 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
PCMTD1-206ENST00000521344 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
PCMTD1-206ENST00000521344 NACADO15069 1562 aa33.82■■■■□ 3.01
PCMTD1-206ENST00000521344 MYO15BQ96JP2 1530 aa33.77■■■■□ 3
PCMTD1-206ENST00000521344 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
PCMTD1-206ENST00000521344 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
PCMTD1-206ENST00000521344 SCRIBQ14160 1630 aa33.03■■■□□ 2.88
PCMTD1-206ENST00000521344 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
PCMTD1-206ENST00000521344 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
PCMTD1-206ENST00000521344 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
PCMTD1-206ENST00000521344 CECR2Q9BXF3 1484 aa31.82■■■□□ 2.69
PCMTD1-206ENST00000521344 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
PCMTD1-206ENST00000521344 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
PCMTD1-206ENST00000521344 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
PCMTD1-206ENST00000521344 CC2D2AQ9P2K1 1620 aa31.56■■■□□ 2.64
PCMTD1-206ENST00000521344 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
PCMTD1-206ENST00000521344 DNAJC5BQ9UF47 199 aa31.5■■■□□ 2.63
PCMTD1-206ENST00000521344 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
PCMTD1-206ENST00000521344 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
PCMTD1-206ENST00000521344 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
PCMTD1-206ENST00000521344 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
PCMTD1-206ENST00000521344 WIZO95785 1651 aa31.28■■■□□ 2.6
PCMTD1-206ENST00000521344 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
PCMTD1-206ENST00000521344 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
PCMTD1-206ENST00000521344 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
PCMTD1-206ENST00000521344 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
PCMTD1-206ENST00000521344 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
PCMTD1-206ENST00000521344 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
PCMTD1-206ENST00000521344 CADPSQ9ULU8 1353 aa30.33■■■□□ 2.45
PCMTD1-206ENST00000521344 NESP48681 1621 aa30.32■■■□□ 2.45
PCMTD1-206ENST00000521344 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
PCMTD1-206ENST00000521344 CFTRP13569 1480 aa30.27■■■□□ 2.44
PCMTD1-206ENST00000521344 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
PCMTD1-206ENST00000521344 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
PCMTD1-206ENST00000521344 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
PCMTD1-206ENST00000521344 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
PCMTD1-206ENST00000521344 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
PCMTD1-206ENST00000521344 CEP164Q9UPV0 1460 aa29.89■■■□□ 2.38
PCMTD1-206ENST00000521344 THOC2Q8NI27 1593 aaKnown RBP29.74■■■□□ 2.35
PCMTD1-206ENST00000521344 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
PCMTD1-206ENST00000521344 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
PCMTD1-206ENST00000521344 ABCC8Q09428 1581 aa29.65■■■□□ 2.34
PCMTD1-206ENST00000521344 WDR62O43379 1518 aa29.62■■■□□ 2.33
PCMTD1-206ENST00000521344 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
PCMTD1-206ENST00000521344 TOPBP1Q92547 1522 aa29.57■■■□□ 2.32
PCMTD1-206ENST00000521344 CUX1P39880 1505 aa29.56■■■□□ 2.32
PCMTD1-206ENST00000521344 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
PCMTD1-206ENST00000521344 SYNJ1O43426 1573 aa29.49■■■□□ 2.31
PCMTD1-206ENST00000521344 TOP2BQ02880 1626 aa29.46■■■□□ 2.31
PCMTD1-206ENST00000521344 BIVM-ERCC5R4GMW8 1640 aa29.46■■■□□ 2.31
PCMTD1-206ENST00000521344 CUX2O14529 1486 aa29.43■■■□□ 2.3
PCMTD1-206ENST00000521344 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
PCMTD1-206ENST00000521344 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
PCMTD1-206ENST00000521344 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
PCMTD1-206ENST00000521344 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
PCMTD1-206ENST00000521344 SOGA1O94964 1423 aa29.25■■■□□ 2.27
PCMTD1-206ENST00000521344 RAD54L2Q9Y4B4 1467 aa29.24■■■□□ 2.27
PCMTD1-206ENST00000521344 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
PCMTD1-206ENST00000521344 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
PCMTD1-206ENST00000521344 WDR97A6NE52 1622 aa29.13■■■□□ 2.25
PCMTD1-206ENST00000521344 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
PCMTD1-206ENST00000521344 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
PCMTD1-206ENST00000521344 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
PCMTD1-206ENST00000521344 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
PCMTD1-206ENST00000521344 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
PCMTD1-206ENST00000521344 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
PCMTD1-206ENST00000521344 GAPVD1Q14C86 1478 aa28.92■■■□□ 2.22
PCMTD1-206ENST00000521344 KIF27Q86VH2 1401 aa28.89■■■□□ 2.21
PCMTD1-206ENST00000521344 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
PCMTD1-206ENST00000521344 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
PCMTD1-206ENST00000521344 GRIN2BQ13224 1484 aa28.83■■■□□ 2.21
PCMTD1-206ENST00000521344 ERICH3Q5RHP9 1530 aa28.77■■■□□ 2.2
PCMTD1-206ENST00000521344 IGF1RP08069 1367 aa28.72■■■□□ 2.19
PCMTD1-206ENST00000521344 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
PCMTD1-206ENST00000521344 EEA1Q15075 1411 aa28.69■■■□□ 2.18
PCMTD1-206ENST00000521344 MAGI1Q96QZ7 1491 aaPredicted RBP28.69■■■□□ 2.18
PCMTD1-206ENST00000521344 FAM9AQ8IZU1 332 aaPredicted RBP28.66■■■□□ 2.18
PCMTD1-206ENST00000521344 CUL7Q14999 1698 aa28.63■■■□□ 2.17
PCMTD1-206ENST00000521344 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
PCMTD1-206ENST00000521344 CSRNP3Q8WYN3 585 aa28.6■■■□□ 2.17
PCMTD1-206ENST00000521344 FHAD1B1AJZ9 1412 aa28.58■■■□□ 2.17
PCMTD1-206ENST00000521344 SYNJ2O15056 1496 aa28.58■■■□□ 2.17
PCMTD1-206ENST00000521344 CHD1O14646 1710 aa28.57■■■□□ 2.16
PCMTD1-206ENST00000521344 CARMIL1Q5VZK9 1371 aa28.56■■■□□ 2.16
PCMTD1-206ENST00000521344 FBLN2P98095 1184 aa28.55■■■□□ 2.16
PCMTD1-206ENST00000521344 CHMP7Q8WUX9 453 aaPredicted RBP28.53■■■□□ 2.16
PCMTD1-206ENST00000521344 PRXQ9BXM0 1461 aa28.48■■■□□ 2.15
PCMTD1-206ENST00000521344 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
PCMTD1-206ENST00000521344 RAPGEF2Q9Y4G8 1499 aa28.45■■■□□ 2.15
PCMTD1-206ENST00000521344 KIF21BO75037 1637 aa28.39■■■□□ 2.13
PCMTD1-206ENST00000521344 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
PCMTD1-206ENST00000521344 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
PCMTD1-206ENST00000521344 NUP160Q12769 1436 aa28.3■■■□□ 2.12
PCMTD1-206ENST00000521344 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
PCMTD1-206ENST00000521344 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
PCMTD1-206ENST00000521344 CLASP1Q7Z460 1538 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms