RNA–Protein interactions for RNA: ENST00000521223.5

FAM49B-219, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-219ENST00000521223 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
FAM49B-219ENST00000521223 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
FAM49B-219ENST00000521223 ABCC9O60706 1549 aa40.88■■■■■ 4.13
FAM49B-219ENST00000521223 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
FAM49B-219ENST00000521223 NACADO15069 1562 aa38.89■■■■□ 3.82
FAM49B-219ENST00000521223 DCAF8L2P0C7V8 631 aa38.68■■■■□ 3.78
FAM49B-219ENST00000521223 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
FAM49B-219ENST00000521223 DNAJC5BQ9UF47 199 aa38.11■■■■□ 3.69
FAM49B-219ENST00000521223 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
FAM49B-219ENST00000521223 UNC13AQ9UPW8 1703 aa38.09■■■■□ 3.69
FAM49B-219ENST00000521223 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
FAM49B-219ENST00000521223 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
FAM49B-219ENST00000521223 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
FAM49B-219ENST00000521223 SHROOM4Q9ULL8 1493 aa37.52■■■■□ 3.6
FAM49B-219ENST00000521223 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
FAM49B-219ENST00000521223 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
FAM49B-219ENST00000521223 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
FAM49B-219ENST00000521223 CECR2Q9BXF3 1484 aa36.84■■■■□ 3.49
FAM49B-219ENST00000521223 NCAPD3P42695 1498 aa35.88■■■■□ 3.33
FAM49B-219ENST00000521223 ATAD2BQ9ULI0 1458 aa35.77■■■■□ 3.32
FAM49B-219ENST00000521223 SMARCA4P51532 1647 aa35.76■■■■□ 3.32
FAM49B-219ENST00000521223 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
FAM49B-219ENST00000521223 BAZ1AQ9NRL2 1556 aaPredicted RBP35.68■■■■□ 3.3
FAM49B-219ENST00000521223 HMGXB3Q12766 1538 aa35.62■■■■□ 3.29
FAM49B-219ENST00000521223 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
FAM49B-219ENST00000521223 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
FAM49B-219ENST00000521223 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
FAM49B-219ENST00000521223 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
FAM49B-219ENST00000521223 CUX2O14529 1486 aa35.23■■■■□ 3.23
FAM49B-219ENST00000521223 NESP48681 1621 aa35.14■■■■□ 3.22
FAM49B-219ENST00000521223 LAMC3Q9Y6N6 1575 aa35.04■■■■□ 3.2
FAM49B-219ENST00000521223 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
FAM49B-219ENST00000521223 WIZO95785 1651 aa34.93■■■■□ 3.18
FAM49B-219ENST00000521223 PDS5BQ9NTI5 1447 aa34.87■■■■□ 3.17
FAM49B-219ENST00000521223 CADPSQ9ULU8 1353 aa34.8■■■■□ 3.16
FAM49B-219ENST00000521223 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
FAM49B-219ENST00000521223 KIF21AQ7Z4S6 1674 aa34.72■■■■□ 3.15
FAM49B-219ENST00000521223 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
FAM49B-219ENST00000521223 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
FAM49B-219ENST00000521223 MRC2Q9UBG0 1479 aa34.5■■■■□ 3.11
FAM49B-219ENST00000521223 CFTRP13569 1480 aa34.44■■■■□ 3.1
FAM49B-219ENST00000521223 CEP164Q9UPV0 1460 aa34.41■■■■□ 3.1
FAM49B-219ENST00000521223 WDR62O43379 1518 aa34.4■■■■□ 3.1
FAM49B-219ENST00000521223 FANCD2Q9BXW9 1451 aa34.38■■■■□ 3.09
FAM49B-219ENST00000521223 CCDC88BA6NC98 1476 aa34.15■■■■□ 3.06
FAM49B-219ENST00000521223 PRDM2Q13029 1718 aa34.1■■■■□ 3.05
FAM49B-219ENST00000521223 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
FAM49B-219ENST00000521223 ABCC8Q09428 1581 aa33.79■■■■□ 3
FAM49B-219ENST00000521223 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
FAM49B-219ENST00000521223 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
FAM49B-219ENST00000521223 OSCARQ8IYS5 282 aa33.68■■■□□ 2.98
FAM49B-219ENST00000521223 DNMBPQ6XZF7 1577 aa33.65■■■□□ 2.98
FAM49B-219ENST00000521223 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
FAM49B-219ENST00000521223 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
FAM49B-219ENST00000521223 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
FAM49B-219ENST00000521223 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
FAM49B-219ENST00000521223 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
FAM49B-219ENST00000521223 SUPT5HO00267 1087 aaKnown RBP33.33■■■□□ 2.93
FAM49B-219ENST00000521223 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
FAM49B-219ENST00000521223 SOGA1O94964 1423 aa33.29■■■□□ 2.92
FAM49B-219ENST00000521223 RAD54L2Q9Y4B4 1467 aa33.24■■■□□ 2.91
FAM49B-219ENST00000521223 FGD5Q6ZNL6 1462 aa33.22■■■□□ 2.91
FAM49B-219ENST00000521223 CUX1P39880 1505 aa33.2■■■□□ 2.91
FAM49B-219ENST00000521223 WDR97A6NE52 1622 aa33.19■■■□□ 2.9
FAM49B-219ENST00000521223 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
FAM49B-219ENST00000521223 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
FAM49B-219ENST00000521223 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
FAM49B-219ENST00000521223 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
FAM49B-219ENST00000521223 CHD1O14646 1710 aa33.11■■■□□ 2.89
FAM49B-219ENST00000521223 FBLN2P98095 1184 aa33.1■■■□□ 2.89
FAM49B-219ENST00000521223 ARHGEF11O15085 1522 aa33.06■■■□□ 2.88
FAM49B-219ENST00000521223 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
FAM49B-219ENST00000521223 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
FAM49B-219ENST00000521223 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
FAM49B-219ENST00000521223 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
FAM49B-219ENST00000521223 ABCA10Q8WWZ4 1543 aa32.89■■■□□ 2.86
FAM49B-219ENST00000521223 GAPVD1Q14C86 1478 aa32.88■■■□□ 2.85
FAM49B-219ENST00000521223 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
FAM49B-219ENST00000521223 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
FAM49B-219ENST00000521223 CYB5RLQ6IPT4 315 aa32.83■■■□□ 2.85
FAM49B-219ENST00000521223 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
FAM49B-219ENST00000521223 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
FAM49B-219ENST00000521223 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
FAM49B-219ENST00000521223 TOP2BQ02880 1626 aa32.77■■■□□ 2.84
FAM49B-219ENST00000521223 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
FAM49B-219ENST00000521223 CLASP1Q7Z460 1538 aa32.77■■■□□ 2.84
FAM49B-219ENST00000521223 ARAP1Q96P48 1450 aa32.73■■■□□ 2.83
FAM49B-219ENST00000521223 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
FAM49B-219ENST00000521223 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
FAM49B-219ENST00000521223 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
FAM49B-219ENST00000521223 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
FAM49B-219ENST00000521223 NUP160Q12769 1436 aa32.42■■■□□ 2.78
FAM49B-219ENST00000521223 TRHP20396 242 aaPredicted RBP32.41■■■□□ 2.78
FAM49B-219ENST00000521223 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
FAM49B-219ENST00000521223 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
FAM49B-219ENST00000521223 ERCC6L2Q5T890 1561 aa32.2■■■□□ 2.75
FAM49B-219ENST00000521223 KIF27Q86VH2 1401 aa32.18■■■□□ 2.74
FAM49B-219ENST00000521223 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
FAM49B-219ENST00000521223 IGF1RP08069 1367 aa32.11■■■□□ 2.73
FAM49B-219ENST00000521223 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms