RNA–Protein interactions for RNA: ENST00000521209.6

MSRA-206, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 3 BASIC

Gene MSRA, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-206ENST00000521209 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
MSRA-206ENST00000521209 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
MSRA-206ENST00000521209 ABCC9O60706 1549 aa36.65■■■■□ 3.46
MSRA-206ENST00000521209 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
MSRA-206ENST00000521209 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
MSRA-206ENST00000521209 NACADO15069 1562 aa35.21■■■■□ 3.23
MSRA-206ENST00000521209 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
MSRA-206ENST00000521209 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
MSRA-206ENST00000521209 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
MSRA-206ENST00000521209 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
MSRA-206ENST00000521209 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
MSRA-206ENST00000521209 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
MSRA-206ENST00000521209 BICRAQ9NZM4 1560 aa34.07■■■■□ 3.05
MSRA-206ENST00000521209 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
MSRA-206ENST00000521209 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
MSRA-206ENST00000521209 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
MSRA-206ENST00000521209 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
MSRA-206ENST00000521209 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
MSRA-206ENST00000521209 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
MSRA-206ENST00000521209 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
MSRA-206ENST00000521209 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
MSRA-206ENST00000521209 NCAPD3P42695 1498 aa32.46■■■□□ 2.79
MSRA-206ENST00000521209 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
MSRA-206ENST00000521209 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
MSRA-206ENST00000521209 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
MSRA-206ENST00000521209 PEG3Q9GZU2 1588 aa32.29■■■□□ 2.76
MSRA-206ENST00000521209 BAZ1BQ9UIG0 1483 aaKnown RBP32.27■■■□□ 2.76
MSRA-206ENST00000521209 WIZO95785 1651 aa32.02■■■□□ 2.72
MSRA-206ENST00000521209 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
MSRA-206ENST00000521209 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
MSRA-206ENST00000521209 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
MSRA-206ENST00000521209 LAMC3Q9Y6N6 1575 aa31.65■■■□□ 2.66
MSRA-206ENST00000521209 NESP48681 1621 aa31.65■■■□□ 2.66
MSRA-206ENST00000521209 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
MSRA-206ENST00000521209 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
MSRA-206ENST00000521209 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
MSRA-206ENST00000521209 CUX2O14529 1486 aa31.32■■■□□ 2.6
MSRA-206ENST00000521209 CFTRP13569 1480 aa31.32■■■□□ 2.6
MSRA-206ENST00000521209 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
MSRA-206ENST00000521209 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
MSRA-206ENST00000521209 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
MSRA-206ENST00000521209 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
MSRA-206ENST00000521209 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
MSRA-206ENST00000521209 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
MSRA-206ENST00000521209 PRDM2Q13029 1718 aa31.1■■■□□ 2.57
MSRA-206ENST00000521209 WDR62O43379 1518 aa30.98■■■□□ 2.55
MSRA-206ENST00000521209 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
MSRA-206ENST00000521209 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
MSRA-206ENST00000521209 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
MSRA-206ENST00000521209 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
MSRA-206ENST00000521209 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
MSRA-206ENST00000521209 POLA1P09884 1462 aaPredicted RBP30.38■■■□□ 2.45
MSRA-206ENST00000521209 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
MSRA-206ENST00000521209 CUX1P39880 1505 aa30.37■■■□□ 2.45
MSRA-206ENST00000521209 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
MSRA-206ENST00000521209 SOGA1O94964 1423 aa30.31■■■□□ 2.44
MSRA-206ENST00000521209 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
MSRA-206ENST00000521209 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
MSRA-206ENST00000521209 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
MSRA-206ENST00000521209 RAD54L2Q9Y4B4 1467 aa30.24■■■□□ 2.43
MSRA-206ENST00000521209 EIF4G3O43432 1585 aaKnown RBP30.22■■■□□ 2.43
MSRA-206ENST00000521209 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
MSRA-206ENST00000521209 TOP2BQ02880 1626 aa30.14■■■□□ 2.42
MSRA-206ENST00000521209 WDR97A6NE52 1622 aa30.14■■■□□ 2.41
MSRA-206ENST00000521209 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
MSRA-206ENST00000521209 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
MSRA-206ENST00000521209 SYNJ1O43426 1573 aa30.09■■■□□ 2.41
MSRA-206ENST00000521209 OSCARQ8IYS5 282 aa30.07■■■□□ 2.4
MSRA-206ENST00000521209 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
MSRA-206ENST00000521209 GRIN2BQ13224 1484 aa29.98■■■□□ 2.39
MSRA-206ENST00000521209 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
MSRA-206ENST00000521209 FBLN2P98095 1184 aa29.94■■■□□ 2.38
MSRA-206ENST00000521209 SNAPC4Q5SXM2 1469 aa29.9■■■□□ 2.38
MSRA-206ENST00000521209 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
MSRA-206ENST00000521209 ABCA5Q8WWZ7 1642 aa29.88■■■□□ 2.37
MSRA-206ENST00000521209 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
MSRA-206ENST00000521209 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
MSRA-206ENST00000521209 CHD1O14646 1710 aa29.85■■■□□ 2.37
MSRA-206ENST00000521209 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
MSRA-206ENST00000521209 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
MSRA-206ENST00000521209 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
MSRA-206ENST00000521209 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
MSRA-206ENST00000521209 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
MSRA-206ENST00000521209 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
MSRA-206ENST00000521209 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
MSRA-206ENST00000521209 ARHGEF11O15085 1522 aa29.5■■■□□ 2.31
MSRA-206ENST00000521209 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
MSRA-206ENST00000521209 RIMBP3CA6NJZ7 1639 aa29.49■■■□□ 2.31
MSRA-206ENST00000521209 RIMBP3BA6NNM3 1639 aa29.49■■■□□ 2.31
MSRA-206ENST00000521209 RIMBP3Q9UFD9 1639 aa29.49■■■□□ 2.31
MSRA-206ENST00000521209 IGF1RP08069 1367 aa29.45■■■□□ 2.31
MSRA-206ENST00000521209 CUL7Q14999 1698 aa29.44■■■□□ 2.3
MSRA-206ENST00000521209 NUP160Q12769 1436 aa29.39■■■□□ 2.3
MSRA-206ENST00000521209 CEP170Q5SW79 1584 aa29.36■■■□□ 2.29
MSRA-206ENST00000521209 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
MSRA-206ENST00000521209 CYB5RLQ6IPT4 315 aa29.28■■■□□ 2.28
MSRA-206ENST00000521209 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
MSRA-206ENST00000521209 RUSC2Q8N2Y8 1516 aa29.21■■■□□ 2.27
MSRA-206ENST00000521209 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
MSRA-206ENST00000521209 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms