RNA–Protein interactions for RNA: ENST00000521163.5

HDAC2-210, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-210ENST00000521163 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
HDAC2-210ENST00000521163 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
HDAC2-210ENST00000521163 ABCC9O60706 1549 aa20.63■□□□□ 0.89
HDAC2-210ENST00000521163 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
HDAC2-210ENST00000521163 NACADO15069 1562 aa20■□□□□ 0.79
HDAC2-210ENST00000521163 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
HDAC2-210ENST00000521163 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
HDAC2-210ENST00000521163 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
HDAC2-210ENST00000521163 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
HDAC2-210ENST00000521163 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
HDAC2-210ENST00000521163 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
HDAC2-210ENST00000521163 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
HDAC2-210ENST00000521163 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
HDAC2-210ENST00000521163 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
HDAC2-210ENST00000521163 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
HDAC2-210ENST00000521163 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
HDAC2-210ENST00000521163 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
HDAC2-210ENST00000521163 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
HDAC2-210ENST00000521163 SMARCA4P51532 1647 aa18.61■□□□□ 0.57
HDAC2-210ENST00000521163 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
HDAC2-210ENST00000521163 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
HDAC2-210ENST00000521163 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
HDAC2-210ENST00000521163 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
HDAC2-210ENST00000521163 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
HDAC2-210ENST00000521163 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
HDAC2-210ENST00000521163 HMGXB3Q12766 1538 aa18.39■□□□□ 0.54
HDAC2-210ENST00000521163 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
HDAC2-210ENST00000521163 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
HDAC2-210ENST00000521163 WIZO95785 1651 aa18.28■□□□□ 0.52
HDAC2-210ENST00000521163 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
HDAC2-210ENST00000521163 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
HDAC2-210ENST00000521163 NESP48681 1621 aa17.9■□□□□ 0.46
HDAC2-210ENST00000521163 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
HDAC2-210ENST00000521163 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
HDAC2-210ENST00000521163 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
HDAC2-210ENST00000521163 CFTRP13569 1480 aa17.81■□□□□ 0.44
HDAC2-210ENST00000521163 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
HDAC2-210ENST00000521163 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
HDAC2-210ENST00000521163 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
HDAC2-210ENST00000521163 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
HDAC2-210ENST00000521163 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
HDAC2-210ENST00000521163 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
HDAC2-210ENST00000521163 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
HDAC2-210ENST00000521163 CUX2O14529 1486 aa17.6■□□□□ 0.41
HDAC2-210ENST00000521163 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
HDAC2-210ENST00000521163 WDR62O43379 1518 aa17.57■□□□□ 0.4
HDAC2-210ENST00000521163 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
HDAC2-210ENST00000521163 DNMBPQ6XZF7 1577 aa17.44■□□□□ 0.38
HDAC2-210ENST00000521163 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
HDAC2-210ENST00000521163 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
HDAC2-210ENST00000521163 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
HDAC2-210ENST00000521163 CUX1P39880 1505 aa17.33■□□□□ 0.37
HDAC2-210ENST00000521163 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
HDAC2-210ENST00000521163 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
HDAC2-210ENST00000521163 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
HDAC2-210ENST00000521163 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
HDAC2-210ENST00000521163 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
HDAC2-210ENST00000521163 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
HDAC2-210ENST00000521163 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
HDAC2-210ENST00000521163 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
HDAC2-210ENST00000521163 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
HDAC2-210ENST00000521163 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
HDAC2-210ENST00000521163 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
HDAC2-210ENST00000521163 SOGA1O94964 1423 aa17.15■□□□□ 0.34
HDAC2-210ENST00000521163 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
HDAC2-210ENST00000521163 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
HDAC2-210ENST00000521163 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
HDAC2-210ENST00000521163 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.323e-7■■■■■ 30.5
HDAC2-210ENST00000521163 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
HDAC2-210ENST00000521163 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
HDAC2-210ENST00000521163 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
HDAC2-210ENST00000521163 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
HDAC2-210ENST00000521163 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
HDAC2-210ENST00000521163 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
HDAC2-210ENST00000521163 CHD1O14646 1710 aa16.92■□□□□ 0.3
HDAC2-210ENST00000521163 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
HDAC2-210ENST00000521163 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
HDAC2-210ENST00000521163 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
HDAC2-210ENST00000521163 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
HDAC2-210ENST00000521163 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
HDAC2-210ENST00000521163 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
HDAC2-210ENST00000521163 CUL7Q14999 1698 aa16.81■□□□□ 0.28
HDAC2-210ENST00000521163 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
HDAC2-210ENST00000521163 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
HDAC2-210ENST00000521163 IGF1RP08069 1367 aa16.76■□□□□ 0.27
HDAC2-210ENST00000521163 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
HDAC2-210ENST00000521163 FBLN2P98095 1184 aa16.74■□□□□ 0.27
HDAC2-210ENST00000521163 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
HDAC2-210ENST00000521163 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
HDAC2-210ENST00000521163 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
HDAC2-210ENST00000521163 NUP160Q12769 1436 aa16.7■□□□□ 0.26
HDAC2-210ENST00000521163 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
HDAC2-210ENST00000521163 EEA1Q15075 1411 aa16.67■□□□□ 0.26
HDAC2-210ENST00000521163 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
HDAC2-210ENST00000521163 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
HDAC2-210ENST00000521163 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
HDAC2-210ENST00000521163 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
HDAC2-210ENST00000521163 SHROOM2Q13796 1616 aa16.6■□□□□ 0.25
HDAC2-210ENST00000521163 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
HDAC2-210ENST00000521163 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms