RNA–Protein interactions for RNA: ENST00000520642.5

ERGIC1-209, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-209ENST00000520642 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
ERGIC1-209ENST00000520642 ABCC9O60706 1549 aa34.65■■■■□ 3.14
ERGIC1-209ENST00000520642 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
ERGIC1-209ENST00000520642 RB1CC1Q8TDY2 1594 aa33.02■■■□□ 2.88
ERGIC1-209ENST00000520642 NACADO15069 1562 aa32.75■■■□□ 2.83
ERGIC1-209ENST00000520642 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.79
ERGIC1-209ENST00000520642 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
ERGIC1-209ENST00000520642 MYO15BQ96JP2 1530 aa32.27■■■□□ 2.76
ERGIC1-209ENST00000520642 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
ERGIC1-209ENST00000520642 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
ERGIC1-209ENST00000520642 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
ERGIC1-209ENST00000520642 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
ERGIC1-209ENST00000520642 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
ERGIC1-209ENST00000520642 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
ERGIC1-209ENST00000520642 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
ERGIC1-209ENST00000520642 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
ERGIC1-209ENST00000520642 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
ERGIC1-209ENST00000520642 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
ERGIC1-209ENST00000520642 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
ERGIC1-209ENST00000520642 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
ERGIC1-209ENST00000520642 CUX2O14529 1486 aa30.06■■■□□ 2.4
ERGIC1-209ENST00000520642 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
ERGIC1-209ENST00000520642 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
ERGIC1-209ENST00000520642 ERCC6Q03468 1493 aa30.03■■■□□ 2.4
ERGIC1-209ENST00000520642 HMGXB3Q12766 1538 aa30■■■□□ 2.39
ERGIC1-209ENST00000520642 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
ERGIC1-209ENST00000520642 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
ERGIC1-209ENST00000520642 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
ERGIC1-209ENST00000520642 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
ERGIC1-209ENST00000520642 NESP48681 1621 aa29.67■■■□□ 2.34
ERGIC1-209ENST00000520642 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
ERGIC1-209ENST00000520642 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
ERGIC1-209ENST00000520642 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
ERGIC1-209ENST00000520642 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
ERGIC1-209ENST00000520642 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
ERGIC1-209ENST00000520642 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
ERGIC1-209ENST00000520642 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
ERGIC1-209ENST00000520642 WIZO95785 1651 aa29.15■■■□□ 2.26
ERGIC1-209ENST00000520642 WDR62O43379 1518 aa29.09■■■□□ 2.25
ERGIC1-209ENST00000520642 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
ERGIC1-209ENST00000520642 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
ERGIC1-209ENST00000520642 CFTRP13569 1480 aa28.89■■■□□ 2.22
ERGIC1-209ENST00000520642 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
ERGIC1-209ENST00000520642 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
ERGIC1-209ENST00000520642 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
ERGIC1-209ENST00000520642 URB2Q14146 1524 aaKnown RBP28.65■■■□□ 2.18
ERGIC1-209ENST00000520642 PRDM2Q13029 1718 aa28.64■■■□□ 2.18
ERGIC1-209ENST00000520642 OSCARQ8IYS5 282 aa28.6■■■□□ 2.17
ERGIC1-209ENST00000520642 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
ERGIC1-209ENST00000520642 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
ERGIC1-209ENST00000520642 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
ERGIC1-209ENST00000520642 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
ERGIC1-209ENST00000520642 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
ERGIC1-209ENST00000520642 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
ERGIC1-209ENST00000520642 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
ERGIC1-209ENST00000520642 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
ERGIC1-209ENST00000520642 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
ERGIC1-209ENST00000520642 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
ERGIC1-209ENST00000520642 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
ERGIC1-209ENST00000520642 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
ERGIC1-209ENST00000520642 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
ERGIC1-209ENST00000520642 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.088e-7■□□□□ 9.1
ERGIC1-209ENST00000520642 CHD1O14646 1710 aa28.01■■■□□ 2.07
ERGIC1-209ENST00000520642 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
ERGIC1-209ENST00000520642 FBLN2P98095 1184 aa27.92■■■□□ 2.06
ERGIC1-209ENST00000520642 SOGA1O94964 1423 aa27.91■■■□□ 2.06
ERGIC1-209ENST00000520642 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
ERGIC1-209ENST00000520642 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
ERGIC1-209ENST00000520642 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
ERGIC1-209ENST00000520642 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
ERGIC1-209ENST00000520642 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
ERGIC1-209ENST00000520642 ARAP1Q96P48 1450 aa27.82■■■□□ 2.04
ERGIC1-209ENST00000520642 SNAPC4Q5SXM2 1469 aa27.8■■■□□ 2.04
ERGIC1-209ENST00000520642 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
ERGIC1-209ENST00000520642 CUX1P39880 1505 aa27.76■■■□□ 2.03
ERGIC1-209ENST00000520642 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
ERGIC1-209ENST00000520642 GRIN2BQ13224 1484 aa27.74■■■□□ 2.03
ERGIC1-209ENST00000520642 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
ERGIC1-209ENST00000520642 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
ERGIC1-209ENST00000520642 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
ERGIC1-209ENST00000520642 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
ERGIC1-209ENST00000520642 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
ERGIC1-209ENST00000520642 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
ERGIC1-209ENST00000520642 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
ERGIC1-209ENST00000520642 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
ERGIC1-209ENST00000520642 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
ERGIC1-209ENST00000520642 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
ERGIC1-209ENST00000520642 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
ERGIC1-209ENST00000520642 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
ERGIC1-209ENST00000520642 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
ERGIC1-209ENST00000520642 NUP160Q12769 1436 aa27.27■■□□□ 1.96
ERGIC1-209ENST00000520642 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
ERGIC1-209ENST00000520642 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
ERGIC1-209ENST00000520642 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
ERGIC1-209ENST00000520642 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
ERGIC1-209ENST00000520642 ERCC6L2Q5T890 1561 aa27.16■■□□□ 1.94
ERGIC1-209ENST00000520642 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
ERGIC1-209ENST00000520642 PRG4Q92954 1404 aaPredicted RBP27■■□□□ 1.91
ERGIC1-209ENST00000520642 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.91
ERGIC1-209ENST00000520642 JPH4Q96JJ6 628 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms