RNA–Protein interactions for RNA: ENST00000520631.5

GINS4-205, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-205ENST00000520631 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
GINS4-205ENST00000520631 CCDC180Q9P1Z9 1646 aa27.04■■□□□ 1.92
GINS4-205ENST00000520631 ABCC9O60706 1549 aa26.48■■□□□ 1.83
GINS4-205ENST00000520631 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
GINS4-205ENST00000520631 NACADO15069 1562 aa25.39■■□□□ 1.65
GINS4-205ENST00000520631 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
GINS4-205ENST00000520631 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
GINS4-205ENST00000520631 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
GINS4-205ENST00000520631 DCAF1Q9Y4B6 1507 aa25.09■■□□□ 1.61
GINS4-205ENST00000520631 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
GINS4-205ENST00000520631 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
GINS4-205ENST00000520631 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
GINS4-205ENST00000520631 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
GINS4-205ENST00000520631 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
GINS4-205ENST00000520631 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
GINS4-205ENST00000520631 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
GINS4-205ENST00000520631 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
GINS4-205ENST00000520631 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
GINS4-205ENST00000520631 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
GINS4-205ENST00000520631 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
GINS4-205ENST00000520631 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
GINS4-205ENST00000520631 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
GINS4-205ENST00000520631 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
GINS4-205ENST00000520631 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
GINS4-205ENST00000520631 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
GINS4-205ENST00000520631 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
GINS4-205ENST00000520631 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
GINS4-205ENST00000520631 WIZO95785 1651 aa23.19■■□□□ 1.3
GINS4-205ENST00000520631 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
GINS4-205ENST00000520631 NESP48681 1621 aa22.91■■□□□ 1.26
GINS4-205ENST00000520631 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
GINS4-205ENST00000520631 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
GINS4-205ENST00000520631 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
GINS4-205ENST00000520631 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
GINS4-205ENST00000520631 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
GINS4-205ENST00000520631 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
GINS4-205ENST00000520631 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
GINS4-205ENST00000520631 CFTRP13569 1480 aa22.6■■□□□ 1.21
GINS4-205ENST00000520631 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
GINS4-205ENST00000520631 CUX2O14529 1486 aa22.56■■□□□ 1.2
GINS4-205ENST00000520631 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
GINS4-205ENST00000520631 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
GINS4-205ENST00000520631 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
GINS4-205ENST00000520631 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
GINS4-205ENST00000520631 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
GINS4-205ENST00000520631 WDR62O43379 1518 aa22.37■■□□□ 1.17
GINS4-205ENST00000520631 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
GINS4-205ENST00000520631 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
GINS4-205ENST00000520631 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
GINS4-205ENST00000520631 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
GINS4-205ENST00000520631 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
GINS4-205ENST00000520631 CUX1P39880 1505 aa21.97■■□□□ 1.11
GINS4-205ENST00000520631 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
GINS4-205ENST00000520631 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
GINS4-205ENST00000520631 ZNF608Q9ULD9 1512 aaPredicted RBP21.91■■□□□ 1.1
GINS4-205ENST00000520631 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
GINS4-205ENST00000520631 DNAJC5Q9H3Z4 198 aa21.88■■□□□ 1.09
GINS4-205ENST00000520631 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
GINS4-205ENST00000520631 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
GINS4-205ENST00000520631 SOGA1O94964 1423 aa21.84■■□□□ 1.09
GINS4-205ENST00000520631 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
GINS4-205ENST00000520631 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
GINS4-205ENST00000520631 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
GINS4-205ENST00000520631 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.08
GINS4-205ENST00000520631 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
GINS4-205ENST00000520631 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
GINS4-205ENST00000520631 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
GINS4-205ENST00000520631 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
GINS4-205ENST00000520631 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
GINS4-205ENST00000520631 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
GINS4-205ENST00000520631 CHD1O14646 1710 aa21.61■■□□□ 1.05
GINS4-205ENST00000520631 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
GINS4-205ENST00000520631 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
GINS4-205ENST00000520631 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
GINS4-205ENST00000520631 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
GINS4-205ENST00000520631 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
GINS4-205ENST00000520631 FBLN2P98095 1184 aa21.53■■□□□ 1.04
GINS4-205ENST00000520631 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
GINS4-205ENST00000520631 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
GINS4-205ENST00000520631 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
GINS4-205ENST00000520631 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
GINS4-205ENST00000520631 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
GINS4-205ENST00000520631 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
GINS4-205ENST00000520631 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1
GINS4-205ENST00000520631 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1
GINS4-205ENST00000520631 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1
GINS4-205ENST00000520631 GRIN2AQ12879 1464 aa21.32■■□□□ 1
GINS4-205ENST00000520631 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
GINS4-205ENST00000520631 ARHGEF11O15085 1522 aa21.29■■□□□ 1
GINS4-205ENST00000520631 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
GINS4-205ENST00000520631 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
GINS4-205ENST00000520631 CUL7Q14999 1698 aa21.24■□□□□ 0.99
GINS4-205ENST00000520631 IGF1RP08069 1367 aa21.23■□□□□ 0.99
GINS4-205ENST00000520631 NUP160Q12769 1436 aa21.21■□□□□ 0.99
GINS4-205ENST00000520631 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
GINS4-205ENST00000520631 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
GINS4-205ENST00000520631 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
GINS4-205ENST00000520631 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
GINS4-205ENST00000520631 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
GINS4-205ENST00000520631 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms