RNA–Protein interactions for RNA: ENST00000520330.1

SNRPCP17-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 17, humanhuman

BASIC

Gene SNRPCP17, Length 205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP17-201ENST00000520330 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
SNRPCP17-201ENST00000520330 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
SNRPCP17-201ENST00000520330 ABCC9O60706 1549 aa20.48■□□□□ 0.87
SNRPCP17-201ENST00000520330 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
SNRPCP17-201ENST00000520330 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
SNRPCP17-201ENST00000520330 NACADO15069 1562 aa19.71■□□□□ 0.75
SNRPCP17-201ENST00000520330 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
SNRPCP17-201ENST00000520330 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.73
SNRPCP17-201ENST00000520330 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
SNRPCP17-201ENST00000520330 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
SNRPCP17-201ENST00000520330 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNRPCP17-201ENST00000520330 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
SNRPCP17-201ENST00000520330 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
SNRPCP17-201ENST00000520330 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
SNRPCP17-201ENST00000520330 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
SNRPCP17-201ENST00000520330 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
SNRPCP17-201ENST00000520330 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
SNRPCP17-201ENST00000520330 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
SNRPCP17-201ENST00000520330 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
SNRPCP17-201ENST00000520330 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
SNRPCP17-201ENST00000520330 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
SNRPCP17-201ENST00000520330 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
SNRPCP17-201ENST00000520330 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
SNRPCP17-201ENST00000520330 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
SNRPCP17-201ENST00000520330 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
SNRPCP17-201ENST00000520330 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
SNRPCP17-201ENST00000520330 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
SNRPCP17-201ENST00000520330 WIZO95785 1651 aa17.99■□□□□ 0.47
SNRPCP17-201ENST00000520330 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
SNRPCP17-201ENST00000520330 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
SNRPCP17-201ENST00000520330 NESP48681 1621 aa17.72■□□□□ 0.43
SNRPCP17-201ENST00000520330 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
SNRPCP17-201ENST00000520330 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
SNRPCP17-201ENST00000520330 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
SNRPCP17-201ENST00000520330 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
SNRPCP17-201ENST00000520330 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
SNRPCP17-201ENST00000520330 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
SNRPCP17-201ENST00000520330 CFTRP13569 1480 aa17.55■□□□□ 0.4
SNRPCP17-201ENST00000520330 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
SNRPCP17-201ENST00000520330 CUX2O14529 1486 aa17.46■□□□□ 0.39
SNRPCP17-201ENST00000520330 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
SNRPCP17-201ENST00000520330 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
SNRPCP17-201ENST00000520330 THOC2Q8NI27 1593 aaKnown RBP17.44■□□□□ 0.38
SNRPCP17-201ENST00000520330 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
SNRPCP17-201ENST00000520330 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
SNRPCP17-201ENST00000520330 WDR62O43379 1518 aa17.32■□□□□ 0.36
SNRPCP17-201ENST00000520330 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
SNRPCP17-201ENST00000520330 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
SNRPCP17-201ENST00000520330 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
SNRPCP17-201ENST00000520330 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
SNRPCP17-201ENST00000520330 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
SNRPCP17-201ENST00000520330 CUX1P39880 1505 aa17.03■□□□□ 0.32
SNRPCP17-201ENST00000520330 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
SNRPCP17-201ENST00000520330 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SNRPCP17-201ENST00000520330 SOGA1O94964 1423 aa16.98■□□□□ 0.31
SNRPCP17-201ENST00000520330 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
SNRPCP17-201ENST00000520330 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
SNRPCP17-201ENST00000520330 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.3
SNRPCP17-201ENST00000520330 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
SNRPCP17-201ENST00000520330 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
SNRPCP17-201ENST00000520330 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
SNRPCP17-201ENST00000520330 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
SNRPCP17-201ENST00000520330 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
SNRPCP17-201ENST00000520330 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPCP17-201ENST00000520330 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
SNRPCP17-201ENST00000520330 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
SNRPCP17-201ENST00000520330 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
SNRPCP17-201ENST00000520330 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
SNRPCP17-201ENST00000520330 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
SNRPCP17-201ENST00000520330 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
SNRPCP17-201ENST00000520330 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
SNRPCP17-201ENST00000520330 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
SNRPCP17-201ENST00000520330 FBLN2P98095 1184 aa16.74■□□□□ 0.27
SNRPCP17-201ENST00000520330 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
SNRPCP17-201ENST00000520330 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
SNRPCP17-201ENST00000520330 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
SNRPCP17-201ENST00000520330 CHD1O14646 1710 aa16.71■□□□□ 0.27
SNRPCP17-201ENST00000520330 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
SNRPCP17-201ENST00000520330 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
SNRPCP17-201ENST00000520330 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
SNRPCP17-201ENST00000520330 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
SNRPCP17-201ENST00000520330 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
SNRPCP17-201ENST00000520330 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
SNRPCP17-201ENST00000520330 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
SNRPCP17-201ENST00000520330 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
SNRPCP17-201ENST00000520330 IGF1RP08069 1367 aa16.53■□□□□ 0.24
SNRPCP17-201ENST00000520330 CUL7Q14999 1698 aa16.5■□□□□ 0.23
SNRPCP17-201ENST00000520330 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
SNRPCP17-201ENST00000520330 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
SNRPCP17-201ENST00000520330 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
SNRPCP17-201ENST00000520330 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
SNRPCP17-201ENST00000520330 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
SNRPCP17-201ENST00000520330 NUP160Q12769 1436 aa16.45■□□□□ 0.22
SNRPCP17-201ENST00000520330 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
SNRPCP17-201ENST00000520330 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
SNRPCP17-201ENST00000520330 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
SNRPCP17-201ENST00000520330 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
SNRPCP17-201ENST00000520330 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
SNRPCP17-201ENST00000520330 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
SNRPCP17-201ENST00000520330 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms