RNA–Protein interactions for RNA: ENST00000520326.5

ERGIC1-207, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 5

Gene ERGIC1, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-207ENST00000520326 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
ERGIC1-207ENST00000520326 ABCC9O60706 1549 aa32.51■■■□□ 2.79
ERGIC1-207ENST00000520326 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
ERGIC1-207ENST00000520326 DNAJC5BQ9UF47 199 aa30.79■■■□□ 2.52
ERGIC1-207ENST00000520326 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
ERGIC1-207ENST00000520326 NACADO15069 1562 aa30.42■■■□□ 2.46
ERGIC1-207ENST00000520326 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
ERGIC1-207ENST00000520326 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
ERGIC1-207ENST00000520326 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
ERGIC1-207ENST00000520326 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
ERGIC1-207ENST00000520326 BICRAQ9NZM4 1560 aa29.84■■■□□ 2.37
ERGIC1-207ENST00000520326 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
ERGIC1-207ENST00000520326 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
ERGIC1-207ENST00000520326 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
ERGIC1-207ENST00000520326 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
ERGIC1-207ENST00000520326 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
ERGIC1-207ENST00000520326 SCRIBQ14160 1630 aa29.26■■■□□ 2.27
ERGIC1-207ENST00000520326 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
ERGIC1-207ENST00000520326 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
ERGIC1-207ENST00000520326 CUX2O14529 1486 aa28.15■■■□□ 2.1
ERGIC1-207ENST00000520326 ERCC6Q03468 1493 aa28.11■■■□□ 2.09
ERGIC1-207ENST00000520326 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
ERGIC1-207ENST00000520326 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
ERGIC1-207ENST00000520326 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
ERGIC1-207ENST00000520326 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
ERGIC1-207ENST00000520326 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
ERGIC1-207ENST00000520326 NESP48681 1621 aa27.8■■■□□ 2.04
ERGIC1-207ENST00000520326 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
ERGIC1-207ENST00000520326 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
ERGIC1-207ENST00000520326 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
ERGIC1-207ENST00000520326 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
ERGIC1-207ENST00000520326 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
ERGIC1-207ENST00000520326 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
ERGIC1-207ENST00000520326 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
ERGIC1-207ENST00000520326 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
ERGIC1-207ENST00000520326 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
ERGIC1-207ENST00000520326 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
ERGIC1-207ENST00000520326 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
ERGIC1-207ENST00000520326 WDR62O43379 1518 aa27.11■■□□□ 1.93
ERGIC1-207ENST00000520326 WIZO95785 1651 aa27.08■■□□□ 1.92
ERGIC1-207ENST00000520326 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
ERGIC1-207ENST00000520326 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
ERGIC1-207ENST00000520326 CFTRP13569 1480 aa26.84■■□□□ 1.89
ERGIC1-207ENST00000520326 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
ERGIC1-207ENST00000520326 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
ERGIC1-207ENST00000520326 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
ERGIC1-207ENST00000520326 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.87
ERGIC1-207ENST00000520326 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
ERGIC1-207ENST00000520326 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
ERGIC1-207ENST00000520326 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
ERGIC1-207ENST00000520326 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
ERGIC1-207ENST00000520326 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
ERGIC1-207ENST00000520326 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
ERGIC1-207ENST00000520326 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
ERGIC1-207ENST00000520326 ARHGEF11O15085 1522 aa26.38■■□□□ 1.81
ERGIC1-207ENST00000520326 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
ERGIC1-207ENST00000520326 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
ERGIC1-207ENST00000520326 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
ERGIC1-207ENST00000520326 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
ERGIC1-207ENST00000520326 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
ERGIC1-207ENST00000520326 AQRO60306 1485 aaKnown RBP eCLIP26.2■■□□□ 1.788e-7■□□□□ 9.1
ERGIC1-207ENST00000520326 CHD1O14646 1710 aa26.17■■□□□ 1.78
ERGIC1-207ENST00000520326 FBLN2P98095 1184 aa26.16■■□□□ 1.78
ERGIC1-207ENST00000520326 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
ERGIC1-207ENST00000520326 TRHP20396 242 aaPredicted RBP26.11■■□□□ 1.77
ERGIC1-207ENST00000520326 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
ERGIC1-207ENST00000520326 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
ERGIC1-207ENST00000520326 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
ERGIC1-207ENST00000520326 SOGA1O94964 1423 aa25.98■■□□□ 1.75
ERGIC1-207ENST00000520326 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
ERGIC1-207ENST00000520326 SNAPC4Q5SXM2 1469 aa25.92■■□□□ 1.74
ERGIC1-207ENST00000520326 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
ERGIC1-207ENST00000520326 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
ERGIC1-207ENST00000520326 CLASP1Q7Z460 1538 aa25.86■■□□□ 1.73
ERGIC1-207ENST00000520326 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
ERGIC1-207ENST00000520326 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
ERGIC1-207ENST00000520326 MAGI1Q96QZ7 1491 aaPredicted RBP25.82■■□□□ 1.72
ERGIC1-207ENST00000520326 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
ERGIC1-207ENST00000520326 CUX1P39880 1505 aa25.78■■□□□ 1.72
ERGIC1-207ENST00000520326 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
ERGIC1-207ENST00000520326 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
ERGIC1-207ENST00000520326 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
ERGIC1-207ENST00000520326 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
ERGIC1-207ENST00000520326 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
ERGIC1-207ENST00000520326 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
ERGIC1-207ENST00000520326 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
ERGIC1-207ENST00000520326 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
ERGIC1-207ENST00000520326 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
ERGIC1-207ENST00000520326 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
ERGIC1-207ENST00000520326 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
ERGIC1-207ENST00000520326 CEP170Q5SW79 1584 aa25.38■■□□□ 1.65
ERGIC1-207ENST00000520326 NUP160Q12769 1436 aa25.37■■□□□ 1.65
ERGIC1-207ENST00000520326 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
ERGIC1-207ENST00000520326 SHROOM2Q13796 1616 aa25.28■■□□□ 1.64
ERGIC1-207ENST00000520326 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
ERGIC1-207ENST00000520326 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
ERGIC1-207ENST00000520326 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
ERGIC1-207ENST00000520326 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
ERGIC1-207ENST00000520326 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
ERGIC1-207ENST00000520326 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms