RNA–Protein interactions for RNA: ENST00000520223.1

GPAT4-205, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 2

Gene GPAT4, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-205ENST00000520223 NISCHQ9Y2I1 1504 aa48.27■■■■■ 5.32
GPAT4-205ENST00000520223 CCDC180Q9P1Z9 1646 aa42.84■■■■■ 4.45
GPAT4-205ENST00000520223 ABCC9O60706 1549 aa41.41■■■■■ 4.22
GPAT4-205ENST00000520223 ZCCHC6Q5VYS8 1495 aaKnown RBP40.28■■■■■ 4.04
GPAT4-205ENST00000520223 NACADO15069 1562 aa40.16■■■■■ 4.02
GPAT4-205ENST00000520223 MYO15BQ96JP2 1530 aa40.1■■■■■ 4.01
GPAT4-205ENST00000520223 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
GPAT4-205ENST00000520223 DCAF1Q9Y4B6 1507 aa40.03■■■■■ 4
GPAT4-205ENST00000520223 DCAF8L2P0C7V8 631 aa40.01■■■■■ 4
GPAT4-205ENST00000520223 UNC13AQ9UPW8 1703 aa39.23■■■■□ 3.87
GPAT4-205ENST00000520223 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
GPAT4-205ENST00000520223 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
GPAT4-205ENST00000520223 PABPN1Q86U42 306 aaKnown RBP eCLIP38.71■■■■□ 3.79
GPAT4-205ENST00000520223 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
GPAT4-205ENST00000520223 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
GPAT4-205ENST00000520223 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
GPAT4-205ENST00000520223 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
GPAT4-205ENST00000520223 CECR2Q9BXF3 1484 aa37.5■■■■□ 3.59
GPAT4-205ENST00000520223 BAZ1AQ9NRL2 1556 aaPredicted RBP37.4■■■■□ 3.58
GPAT4-205ENST00000520223 SMARCA4P51532 1647 aa37.39■■■■□ 3.58
GPAT4-205ENST00000520223 MROH2BQ7Z745 1585 aa37.17■■■■□ 3.54
GPAT4-205ENST00000520223 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
GPAT4-205ENST00000520223 PEG3Q9GZU2 1588 aa37.08■■■■□ 3.53
GPAT4-205ENST00000520223 ATAD2BQ9ULI0 1458 aa37.07■■■■□ 3.52
GPAT4-205ENST00000520223 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
GPAT4-205ENST00000520223 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
GPAT4-205ENST00000520223 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
GPAT4-205ENST00000520223 WIZO95785 1651 aa36.8■■■■□ 3.48
GPAT4-205ENST00000520223 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
GPAT4-205ENST00000520223 TOP2AP11388 1531 aaKnown RBP36.45■■■■□ 3.43
GPAT4-205ENST00000520223 SUPT5HO00267 1087 aaKnown RBP36.07■■■■□ 3.36
GPAT4-205ENST00000520223 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
GPAT4-205ENST00000520223 CCDC88BA6NC98 1476 aa35.99■■■■□ 3.35
GPAT4-205ENST00000520223 NESP48681 1621 aa35.94■■■■□ 3.34
GPAT4-205ENST00000520223 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
GPAT4-205ENST00000520223 CFTRP13569 1480 aa35.82■■■■□ 3.32
GPAT4-205ENST00000520223 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
GPAT4-205ENST00000520223 ERCC6Q03468 1493 aa35.68■■■■□ 3.3
GPAT4-205ENST00000520223 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
GPAT4-205ENST00000520223 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
GPAT4-205ENST00000520223 FANCD2Q9BXW9 1451 aa35.51■■■■□ 3.28
GPAT4-205ENST00000520223 CEP164Q9UPV0 1460 aa35.44■■■■□ 3.26
GPAT4-205ENST00000520223 THOC2Q8NI27 1593 aaKnown RBP35.41■■■■□ 3.26
GPAT4-205ENST00000520223 MRC2Q9UBG0 1479 aa35.32■■■■□ 3.24
GPAT4-205ENST00000520223 CUX2O14529 1486 aa35.27■■■■□ 3.24
GPAT4-205ENST00000520223 WDR62O43379 1518 aa35.23■■■■□ 3.23
GPAT4-205ENST00000520223 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
GPAT4-205ENST00000520223 ABCC8Q09428 1581 aa35.08■■■■□ 3.21
GPAT4-205ENST00000520223 DNMBPQ6XZF7 1577 aa35.01■■■■□ 3.2
GPAT4-205ENST00000520223 TOPBP1Q92547 1522 aa35■■■■□ 3.19
GPAT4-205ENST00000520223 CUX1P39880 1505 aa34.85■■■■□ 3.17
GPAT4-205ENST00000520223 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
GPAT4-205ENST00000520223 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
GPAT4-205ENST00000520223 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
GPAT4-205ENST00000520223 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
GPAT4-205ENST00000520223 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
GPAT4-205ENST00000520223 FGD5Q6ZNL6 1462 aa34.67■■■■□ 3.14
GPAT4-205ENST00000520223 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
GPAT4-205ENST00000520223 TARBP1Q13395 1621 aaKnown RBP34.63■■■■□ 3.13
GPAT4-205ENST00000520223 SOGA1O94964 1423 aa34.56■■■■□ 3.12
GPAT4-205ENST00000520223 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
GPAT4-205ENST00000520223 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
GPAT4-205ENST00000520223 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
GPAT4-205ENST00000520223 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
GPAT4-205ENST00000520223 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
GPAT4-205ENST00000520223 AQRO60306 1485 aaKnown RBP eCLIP34.31■■■■□ 3.08
GPAT4-205ENST00000520223 TDRD9Q8NDG6 1382 aaKnown RBP34.28■■■■□ 3.08
GPAT4-205ENST00000520223 ABCA5Q8WWZ7 1642 aa34.24■■■■□ 3.07
GPAT4-205ENST00000520223 GAPVD1Q14C86 1478 aa34.19■■■■□ 3.06
GPAT4-205ENST00000520223 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
GPAT4-205ENST00000520223 PBRM1Q86U86 1689 aa34.13■■■■□ 3.05
GPAT4-205ENST00000520223 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
GPAT4-205ENST00000520223 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
GPAT4-205ENST00000520223 KIF27Q86VH2 1401 aa34.02■■■■□ 3.04
GPAT4-205ENST00000520223 SNAPC4Q5SXM2 1469 aa34.01■■■■□ 3.04
GPAT4-205ENST00000520223 ERICH3Q5RHP9 1530 aa34■■■■□ 3.03
GPAT4-205ENST00000520223 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
GPAT4-205ENST00000520223 CHD1O14646 1710 aa33.9■■■■□ 3.02
GPAT4-205ENST00000520223 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
GPAT4-205ENST00000520223 ADAMTS12P58397 1594 aa33.86■■■■□ 3.01
GPAT4-205ENST00000520223 FHAD1B1AJZ9 1412 aa33.82■■■■□ 3
GPAT4-205ENST00000520223 IGF1RP08069 1367 aa33.82■■■■□ 3
GPAT4-205ENST00000520223 OSCARQ8IYS5 282 aa33.81■■■■□ 3
GPAT4-205ENST00000520223 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
GPAT4-205ENST00000520223 CUL7Q14999 1698 aa33.78■■■■□ 3
GPAT4-205ENST00000520223 FBLN2P98095 1184 aa33.76■■■□□ 2.99
GPAT4-205ENST00000520223 RUSC2Q8N2Y8 1516 aa33.75■■■□□ 2.99
GPAT4-205ENST00000520223 DNAJC5Q9H3Z4 198 aa33.72■■■□□ 2.99
GPAT4-205ENST00000520223 GRIN2AQ12879 1464 aa33.7■■■□□ 2.99
GPAT4-205ENST00000520223 EEA1Q15075 1411 aa33.63■■■□□ 2.97
GPAT4-205ENST00000520223 CARMIL1Q5VZK9 1371 aa33.62■■■□□ 2.97
GPAT4-205ENST00000520223 NUP160Q12769 1436 aa33.56■■■□□ 2.96
GPAT4-205ENST00000520223 CLASP1Q7Z460 1538 aa33.55■■■□□ 2.96
GPAT4-205ENST00000520223 CEP170Q5SW79 1584 aa33.51■■■□□ 2.96
GPAT4-205ENST00000520223 RAPGEF2Q9Y4G8 1499 aa33.48■■■□□ 2.95
GPAT4-205ENST00000520223 CSRNP3Q8WYN3 585 aa33.47■■■□□ 2.95
GPAT4-205ENST00000520223 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
GPAT4-205ENST00000520223 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
GPAT4-205ENST00000520223 FAM9AQ8IZU1 332 aaPredicted RBP33.31■■■□□ 2.92
GPAT4-205ENST00000520223 SHROOM2Q13796 1616 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms